RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
UBE3B-204ENST00000449510 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 PDE6AP16499 860 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 PEX19P40855 299 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 TADA2BQ86TJ2 420 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 EIF4E1BA6NMX2 242 aaKnown RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 MFAP3LO75121 409 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 TUBBP07437 444 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 KRT26Q7Z3Y9 468 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 CCDC25Q86WR0 208 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 CCDC43Q96MW1 224 aaKnown RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 LAMC1P11047 1609 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 BUB1BO60566 1050 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 PPP6R2O75170 966 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 NDUFA10O95299 355 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 NEFHP12036 1026 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 EXOSC10Q01780 885 aaKnown RBP13.86□□□□□ -0.19
UBE3B-204ENST00000449510 IFNL3Q8IZI9 196 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 EHD4Q9H223 541 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 TNRQ92752 1358 aa13.86□□□□□ -0.19
UBE3B-204ENST00000449510 EZRP15311 586 aaKnown RBP13.85□□□□□ -0.19
UBE3B-204ENST00000449510 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
UBE3B-204ENST00000449510 PPFIA1Q13136 1202 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 MSL1Q68DK7 614 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 CCDC24Q8N4L8 307 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.197e-6■■■■■ 33.4
UBE3B-204ENST00000449510 MMS19Q96T76 1030 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 PAIP2Q9BPZ3 127 aaKnown RBP13.85□□□□□ -0.19
UBE3B-204ENST00000449510 KAT14Q9H8E8 782 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 G3V3G9 751 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 ATP1A1P05023 1023 aaKnown RBP13.85□□□□□ -0.19
UBE3B-204ENST00000449510 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 DCAF8Q5TAQ9 597 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 LRWD1Q9UFC0 647 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 SPHKAPQ2M3C7 1700 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 A0A087WUV0 522 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-204ENST00000449510 NEBLO76041 1014 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 RESP18Q5W5W9 173 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-204ENST00000449510 TMTC2Q8N394 836 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
UBE3B-204ENST00000449510 CEP104O60308 925 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 MOCS3O95396 460 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 B4GALNT4Q76KP1 1039 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 BAZ2BQ9UIF8 2168 aaKnown RBP13.84□□□□□ -0.19
UBE3B-204ENST00000449510 VIMP08670 466 aaKnown RBP13.84□□□□□ -0.19
UBE3B-204ENST00000449510 RASSF7Q02833 373 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 HAUS4Q9H6D7 363 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 EPB41L5Q9HCM4 733 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 LRRIQ3A6PVS8 624 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-204ENST00000449510 TRAF5O00463 557 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 TXKP42681 527 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 EFCAB13Q8IY85 973 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-204ENST00000449510 CALML4Q96GE6 196 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 PAGE5Q96GU1 130 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 SLC39A2Q9NP94 309 aa13.84□□□□□ -0.19
UBE3B-204ENST00000449510 PARP1P09874 1014 aaKnown RBP13.83□□□□□ -0.19
UBE3B-204ENST00000449510 EHHADHQ08426 723 aa13.83□□□□□ -0.19
UBE3B-204ENST00000449510 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.19
UBE3B-204ENST00000449510 NELFCDQ8IXH7 590 aa13.83□□□□□ -0.19
UBE3B-204ENST00000449510 USP6P35125 1406 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 ABL1P00519 1130 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 CUL4BQ13620 913 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 GREM2Q9H772 168 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■■■ 231.7
UBE3B-204ENST00000449510 TNKSO95271 1327 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-204ENST00000449510 TMEM110-MUSTN1A8MSY1 372 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-204ENST00000449510 NCK2O43639 380 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 ZRANB2O95218 330 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBE3B-204ENST00000449510 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
UBE3B-204ENST00000449510 BCAMP50895 628 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 TUBB4BP68371 445 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 BEND6Q5SZJ8 279 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-204ENST00000449510 CTNNBL1Q8WYA6 563 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-204ENST00000449510 CPS1P31327 1500 aa13.83□□□□□ -0.2
UBE3B-204ENST00000449510 MAGEB6P1A0A0J9YX57 407 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 FTCDO95954 541 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 KRT13P13646 458 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 KRT12Q99456 494 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 TSG101Q99816 390 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 COL3A1P02461 1466 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-204ENST00000449510 CLTAP09496 248 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 UQCRFS1P1P0C7P4 283 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 CAVIN4Q5BKX8 364 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 ABHD10Q9NUJ1 306 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms