RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 COG2Q14746 738 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 GIMAP6Q6P9H5 292 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 PLEKHH3Q7Z736 793 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 U2AF1L4Q8WU68 220 aaKnown RBP13.86□□□□□ -0.19
CCDC197-203ENST00000449472 GTF3C2Q8WUA4 911 aaPredicted RBP13.86□□□□□ -0.19
CCDC197-203ENST00000449472 DEFB118Q96PH6 123 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 ARHGEF10LQ9HCE6 1279 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
CCDC197-203ENST00000449472 TFRCP02786 760 aaKnown RBP13.85□□□□□ -0.19
CCDC197-203ENST00000449472 GNAT2P19087 354 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 TDO2P48775 406 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 PDE1AP54750 535 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 LRRFIP1Q32MZ4 808 aaKnown RBP13.85□□□□□ -0.19
CCDC197-203ENST00000449472 ZMYM1Q5SVZ6 1142 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 MORN1Q5T089 497 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 LBX2Q6XYB7 198 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 TRIB2Q92519 343 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 USP6NLQ92738 828 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 LNPKQ9C0E8 428 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 KANSL2Q9H9L4 492 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
CCDC197-203ENST00000449472 RLFQ13129 1914 aa13.85□□□□□ -0.19
CCDC197-203ENST00000449472 PRDM1O75626 825 aa13.84□□□□□ -0.19
CCDC197-203ENST00000449472 RASA1P20936 1047 aa13.84□□□□□ -0.19
CCDC197-203ENST00000449472 CCL14Q16627 93 aa13.84□□□□□ -0.19
CCDC197-203ENST00000449472 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
CCDC197-203ENST00000449472 RWDD1Q9H446 243 aaPredicted RBP13.84□□□□□ -0.19
CCDC197-203ENST00000449472 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
CCDC197-203ENST00000449472 HMGCRP04035 888 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 XRCC5P13010 732 aaKnown RBP13.83□□□□□ -0.2
CCDC197-203ENST00000449472 DSG3P32926 999 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 CCNA1P78396 465 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 AAMPQ13685 434 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
CCDC197-203ENST00000449472 UBE2Q1Q7Z7E8 422 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 LPAR1Q92633 364 aa13.83□□□□□ -0.2
CCDC197-203ENST00000449472 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC197-203ENST00000449472 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
CCDC197-203ENST00000449472 RAD21O60216 631 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 FLOT1O75955 427 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 PTPREP23469 700 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 RGS2P41220 211 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 MAP2K5Q13163 448 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 ZNF444Q8N0Y2 327 aaPredicted RBP13.82□□□□□ -0.2
CCDC197-203ENST00000449472 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 EVI5LQ96CN4 794 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 MOV10L1Q9BXT6 1211 aaKnown RBP13.82□□□□□ -0.2
CCDC197-203ENST00000449472 NACAP1Q9BZK3 213 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 SH2D4AQ9H788 454 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 HMX1Q9NP08 348 aaPredicted RBP13.82□□□□□ -0.2
CCDC197-203ENST00000449472 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 FBXO28Q9NVF7 368 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 RPTORQ8N122 1335 aa13.82□□□□□ -0.2
CCDC197-203ENST00000449472 WDR46O15213 610 aaKnown RBP13.81□□□□□ -0.2
CCDC197-203ENST00000449472 FOXP2O15409 715 aa13.81□□□□□ -0.2
CCDC197-203ENST00000449472 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
CCDC197-203ENST00000449472 CACNB2Q08289 660 aaPredicted RBP13.81□□□□□ -0.2
CCDC197-203ENST00000449472 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
CCDC197-203ENST00000449472 DPF3Q92784 378 aa13.81□□□□□ -0.2
CCDC197-203ENST00000449472 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
CCDC197-203ENST00000449472 FLRT1Q9NZU1 646 aa13.81□□□□□ -0.2
CCDC197-203ENST00000449472 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
CCDC197-203ENST00000449472 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 F5H6K3 240 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 FARP2O94887 1054 aaPredicted RBP13.8□□□□□ -0.2
CCDC197-203ENST00000449472 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
CCDC197-203ENST00000449472 ERCC3P19447 782 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 KLRC3Q07444 240 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 PLS1Q14651 629 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 FAM47AQ5JRC9 791 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 MAP3K21Q5TCX8 1036 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 NPLOC4Q8TAT6 608 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
CCDC197-203ENST00000449472 NAPBQ9H115 298 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 ROBO3Q96MS0 1386 aa13.8□□□□□ -0.2
CCDC197-203ENST00000449472 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
CCDC197-203ENST00000449472 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
CCDC197-203ENST00000449472 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
CCDC197-203ENST00000449472 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
CCDC197-203ENST00000449472 H0YGN5 161 aa13.79□□□□□ -0.2
CCDC197-203ENST00000449472 CCND3P30281 292 aaPredicted RBP13.79□□□□□ -0.2
CCDC197-203ENST00000449472 NUCB1Q02818 461 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms