RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 SCN7AQ01118 1682 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 A0A087X0B3 334 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 CCDC151A5D8V7 595 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 LRRC10BA6NIK2 292 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 PPP1R3GB7ZBB8 358 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 SNAP23O00161 211 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 RGL2O15211 777 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 IGSF3O75054 1194 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 TXLNAP40222 546 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 CRKLP46109 303 aaKnown RBP19.13■□□□□ 0.65
SNHG17-207ENST00000449469 ARL6IP4Q66PJ3 421 aaKnown RBP19.13■□□□□ 0.65
SNHG17-207ENST00000449469 TMTC1Q8IUR5 882 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 FAM177A1Q8N128 213 aaPredicted RBP19.13■□□□□ 0.65
SNHG17-207ENST00000449469 UBXN6Q9BZV1 441 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 LIMA1Q9UHB6 759 aaKnown RBP19.13■□□□□ 0.65
SNHG17-207ENST00000449469 RWDD2AQ9UIY3 292 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 V9GY48 417 aaPredicted RBP19.13■□□□□ 0.65
SNHG17-207ENST00000449469 CNTNAP5Q8WYK1 1306 aa19.13■□□□□ 0.65
SNHG17-207ENST00000449469 ZBTB22O15209 634 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 GTPBP6O43824 516 aaPredicted RBP19.12■□□□□ 0.65
SNHG17-207ENST00000449469 AFMP43652 599 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 ADGRA1Q86SQ6 560 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 SHISA4Q96DD7 197 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 ABCF2Q9UG63 623 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 NIP7Q9Y221 180 aaKnown RBP eCLIP19.12■□□□□ 0.65
SNHG17-207ENST00000449469 TUBBP07437 444 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 RBL2Q08999 1139 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 SRGAP1Q7Z6B7 1085 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 ANKRD18AQ8IVF6 992 aa19.12■□□□□ 0.65
SNHG17-207ENST00000449469 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
SNHG17-207ENST00000449469 CALML3P27482 149 aa19.11■□□□□ 0.65
SNHG17-207ENST00000449469 E2F4Q16254 413 aa19.11■□□□□ 0.65
SNHG17-207ENST00000449469 CLEC4GQ6UXB4 293 aa19.11■□□□□ 0.65
SNHG17-207ENST00000449469 MSL3Q8N5Y2 521 aaKnown RBP19.11■□□□□ 0.65
SNHG17-207ENST00000449469 MRPL44Q9H9J2 332 aaKnown RBP19.11■□□□□ 0.65
SNHG17-207ENST00000449469 BSDC1Q9NW68 430 aaPredicted RBP19.11■□□□□ 0.65
SNHG17-207ENST00000449469 CDC23Q9UJX2 597 aa19.11■□□□□ 0.65
SNHG17-207ENST00000449469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.11■□□□□ 0.65
SNHG17-207ENST00000449469 LAMB1P07942 1786 aa19.11■□□□□ 0.65
SNHG17-207ENST00000449469 SOWAHDA6NJG2 315 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 TEX33O43247 280 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 HSPA2P54652 639 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
SNHG17-207ENST00000449469 NPY5RQ15761 445 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 KLHL10Q6JEL2 608 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 HNRNPLLQ8WVV9 542 aaKnown RBP19.1■□□□□ 0.65
SNHG17-207ENST00000449469 PLEKHA8P1O95397 391 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 KIF5BP33176 963 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 CYP2C19P33261 490 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 LONP1P36776 959 aaKnown RBP19.1■□□□□ 0.65
SNHG17-207ENST00000449469 PTGDRQ13258 359 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 PTPN21Q16825 1174 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 DESI2Q9BSY9 194 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 SH3GLB2Q9NR46 395 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 CALCOCO1Q9P1Z2 691 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 STRCQ7RTU9 1775 aa19.1■□□□□ 0.65
SNHG17-207ENST00000449469 COL1A1P02452 1464 aaPredicted RBP19.1■□□□□ 0.65
SNHG17-207ENST00000449469 FAM205CA6NFA0 338 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 TBC1D8O95759 1140 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 MYL1P05976 194 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 SCG2P13521 617 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 ATP6V1AP38606 617 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 CHMP4BP1P59074 171 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 PAK1Q13153 545 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 EARS2Q5JPH6 523 aaKnown RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 RAD9BQ6WBX8 426 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 MAST2Q6P0Q8 1798 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 KARSQ15046 597 aaKnown RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 PFKFB3Q16875 520 aaPredicted RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 ZNF658Q5TYW1 1059 aaPredicted RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 PDXDC2PQ6P474 469 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 CYP26C1Q6V0L0 522 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 PARD6BQ9BYG5 372 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 ATP8A2Q9NTI2 1148 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 ARPP21Q9UBL0 812 aaPredicted RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 CTNND2Q9UQB3 1225 aa19.09■□□□□ 0.65
SNHG17-207ENST00000449469 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
SNHG17-207ENST00000449469 XDHP47989 1333 aa19.08■□□□□ 0.65
SNHG17-207ENST00000449469 CTAGE9A4FU28 777 aa19.08■□□□□ 0.64
SNHG17-207ENST00000449469 GYPCP04921 128 aa19.08■□□□□ 0.64
SNHG17-207ENST00000449469 ZNF174Q15697 407 aa19.08■□□□□ 0.64
SNHG17-207ENST00000449469 SBK1Q52WX2 424 aa19.08■□□□□ 0.64
SNHG17-207ENST00000449469 CTR9Q6PD62 1173 aa19.08■□□□□ 0.64
SNHG17-207ENST00000449469 CRNKL1Q9BZJ0 848 aaKnown RBP19.08■□□□□ 0.64
SNHG17-207ENST00000449469 LOC102724428A0A0B4J2F2 783 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 SIK1P57059 783 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 NLRP5P59047 1200 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 GPS2Q13227 327 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 N4BP3O15049 544 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 PRDM1O75626 825 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 CASP14P31944 242 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 STX17P56962 302 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 MTF1Q14872 753 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 KRT31Q15323 416 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 WHAMMP3Q1A5X7 153 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 ZNF831Q5JPB2 1677 aa19.07■□□□□ 0.64
SNHG17-207ENST00000449469 ERLIN1O75477 346 aa19.06■□□□□ 0.64
SNHG17-207ENST00000449469 USP5P45974 858 aa19.06■□□□□ 0.64
SNHG17-207ENST00000449469 PIP4K2BP78356 416 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms