RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCN10A-201ENST00000449082 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
SCN10A-201ENST00000449082 DDAH1O94760 285 aa11.32□□□□□ -0.6
SCN10A-201ENST00000449082 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
SCN10A-201ENST00000449082 ANKRD35Q8N283 1001 aa11.32□□□□□ -0.6
SCN10A-201ENST00000449082 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
SCN10A-201ENST00000449082 EDC3Q96F86 508 aaKnown RBP11.32□□□□□ -0.6
SCN10A-201ENST00000449082 KDM5DQ9BY66 1539 aa11.32□□□□□ -0.6
SCN10A-201ENST00000449082 AATKQ6ZMQ8 1374 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 JAK2O60674 1132 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 TRIM37O94972 964 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 PSMC4P43686 418 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 FAM102BQ5T8I3 360 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 TICAM2Q86XR7 235 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 GREM2Q9H772 168 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 CIAO1O76071 339 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 IVLP07476 585 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 LRRC47Q8N1G4 583 aaKnown RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 H0YCG3 227 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 FLOT1O75955 427 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 PDE8BO95263 885 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 CCT6BQ92526 530 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 IQCDQ96DY2 449 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 DDX23Q9BUQ8 820 aaKnown RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 ZMYM6O95789 1325 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 CLUL1Q15846 466 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 TAB2Q9NYJ8 693 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 UTP11Q9Y3A2 253 aaKnown RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 MED23Q9ULK4 1368 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 UAP1Q16222 522 aaPredicted RBP11.31□□□□□ -0.6
SCN10A-201ENST00000449082 PRR16Q569H4 304 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 GPBP1Q86WP2 473 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
SCN10A-201ENST00000449082 TNKSO95271 1327 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 NR1I2O75469 434 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SLFN13Q68D06 897 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SYCE1Q8N0S2 351 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SH3BP5O60239 455 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SERPINB2P05120 415 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 RFX1P22670 979 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 KLHL30Q0D2K2 578 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SFMBT2Q5VUG0 894 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 RIOK1Q9BRS2 568 aaKnown RBP11.3□□□□□ -0.6
SCN10A-201ENST00000449082 TEKT3Q9BXF9 490 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 NKIRAS1Q9NYS0 192 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 PCDHA12Q9UN75 941 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 NFE2L3Q9Y4A8 694 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 CRCPO75575 148 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 BLZF1Q9H2G9 400 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 METP08581 1390 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 A0A0D9SFI3 127 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 ARHGEF6Q15052 776 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 CPLX4Q7Z7G2 160 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 GOLGA5Q8TBA6 731 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCN10A-201ENST00000449082 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 V9GYY5 206 aaPredicted RBP11.3□□□□□ -0.6
SCN10A-201ENST00000449082 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
SCN10A-201ENST00000449082 ATP7BP35670 1465 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
SCN10A-201ENST00000449082 BBOX1O75936 387 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 SCG2P13521 617 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 CNGA1P29973 690 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 STIM2Q9P246 746 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 XKR9Q5GH70 373 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 C8orf74Q6P047 294 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 MAGEA1P43355 309 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 LIG4P49917 911 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 PPP2R3AQ06190 1150 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms