RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PRAMEF19Q5SWL8 479 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 NCAPG2Q86XI2 1143 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 FTSJ3Q8IY81 847 aaKnown RBP21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 BADQ92934 168 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 FERMT2Q96AC1 680 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 BCL11AQ9H165 835 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 MCM9Q9NXL9 1143 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 SLC5A4Q9NY91 659 aa21.88■■□□□ 1.09
CHCHD3-203ENST00000448878 ERCC3P19447 782 aa21.87■■□□□ 1.09
CHCHD3-203ENST00000448878 ITPRIPQ8IWB1 547 aa21.87■■□□□ 1.09
CHCHD3-203ENST00000448878 SPATC1LQ9H0A9 340 aa21.87■■□□□ 1.09
CHCHD3-203ENST00000448878 NOP58Q9Y2X3 529 aaKnown RBP21.87■■□□□ 1.09
CHCHD3-203ENST00000448878 SEPT4O43236 478 aa21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 ADCYAP1R1P41586 468 aa21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 TRIM60Q495X7 471 aa21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 C9orf50Q5SZB4 431 aa21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 OLFML2BQ68BL8 750 aa21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 AACSQ86V21 672 aa21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 CDX2Q99626 313 aaPredicted RBP21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 CRNKL1Q9BZJ0 848 aaKnown RBP21.86■■□□□ 1.09
CHCHD3-203ENST00000448878 A0A1W2PRG0 241 aa21.85■■□□□ 1.09
CHCHD3-203ENST00000448878 COBLO75128 1261 aa21.85■■□□□ 1.09
CHCHD3-203ENST00000448878 SEMA6BQ9H3T3 888 aa21.85■■□□□ 1.09
CHCHD3-203ENST00000448878 SLC9C2Q5TAH2 1124 aa21.84■■□□□ 1.09
CHCHD3-203ENST00000448878 MAFAQ8NHW3 353 aaPredicted RBP21.84■■□□□ 1.09
CHCHD3-203ENST00000448878 RIOK1Q9BRS2 568 aaKnown RBP21.84■■□□□ 1.09
CHCHD3-203ENST00000448878 EXOC6BQ9Y2D4 811 aa21.84■■□□□ 1.09
CHCHD3-203ENST00000448878 UNC80Q8N2C7 3258 aa21.84■■□□□ 1.09
CHCHD3-203ENST00000448878 FLOT1O75955 427 aa21.83■■□□□ 1.09
CHCHD3-203ENST00000448878 EVX2Q03828 476 aa21.83■■□□□ 1.09
CHCHD3-203ENST00000448878 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.09
CHCHD3-203ENST00000448878 SPICE1Q8N0Z3 855 aa21.83■■□□□ 1.09
CHCHD3-203ENST00000448878 SHCBP1Q8NEM2 672 aa21.83■■□□□ 1.09
CHCHD3-203ENST00000448878 MROH8Q9H579 483 aa21.83■■□□□ 1.09
CHCHD3-203ENST00000448878 DSG3P32926 999 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 GABPAQ06546 454 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 LRRC41Q15345 812 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 TMED8Q6PL24 325 aaPredicted RBP21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 SH3RF1Q7Z6J0 888 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 MB21D1Q8N884 522 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 SDR42E1Q8WUS8 393 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 MYLIPQ8WY64 445 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 ARHGEF10LQ9HCE6 1279 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 IL1RAPL2Q9NP60 686 aa21.82■■□□□ 1.08
CHCHD3-203ENST00000448878 FCER1AP12319 257 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 FAM47AQ5JRC9 791 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 TMEM179Q6ZVK1 233 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 ERC1Q8IUD2 1116 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 SLC44A5Q8NCS7 719 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 ATG4CQ96DT6 458 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 DNAJC2Q99543 621 aaKnown RBP21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 PDLIM7Q9NR12 457 aa21.81■■□□□ 1.08
CHCHD3-203ENST00000448878 LTBP2Q14767 1821 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 TRIM43BA6NCK2 446 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 RAD21O60216 631 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 IGHA2P01877 340 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 CYP2D6P10635 497 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 PDE6AP16499 860 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 TLE2Q04725 743 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 KIAA1755Q5JYT7 1200 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 TRIM43Q96BQ3 446 aaPredicted RBP21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 DYNLL2Q96FJ2 89 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 MAML3Q96JK9 1138 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 RLFQ13129 1914 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 ZNF532Q9HCE3 1301 aa21.8■■□□□ 1.08
CHCHD3-203ENST00000448878 NAV1Q8NEY1 1877 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 LAMA2P24043 3122 aaKnown RBP21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 APBB1O00213 710 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 RARBP10826 455 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 SMAD3P84022 425 aaKnown RBP21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 CLEC10AQ8IUN9 316 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 SH2D4AQ9H788 454 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 DCP1AQ9NPI6 582 aaPredicted RBP21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 XPNPEP3Q9NQH7 507 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 TACC3Q9Y6A5 838 aa21.79■■□□□ 1.08
CHCHD3-203ENST00000448878 GOLIM4O00461 696 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 FOSL2P15408 326 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 ICA1Q05084 483 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 ABRAQ8N0Z2 381 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 LCORLQ8N3X6 602 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 MMP19Q99542 508 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 SWAP70Q9UH65 585 aa21.78■■□□□ 1.08
CHCHD3-203ENST00000448878 CUL9Q8IWT3 2517 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 PGK1P00558 417 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 RAG1P15918 1043 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 SNX17Q15036 470 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 CEP85Q6P2H3 762 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 RNF180Q86T96 592 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 RNPC3Q96LT9 517 aaKnown RBP21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 TTYH1Q9H313 450 aaPredicted RBP21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 ARMT1Q9H993 441 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 ZNF236Q9UL36 1845 aa21.77■■□□□ 1.08
CHCHD3-203ENST00000448878 CCER2I3L3R5 266 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 PQBP1O60828 265 aaKnown RBP21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 SLC25A27O95847 323 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 PGK2P07205 417 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 CLTBP09497 229 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 RLBP1P12271 317 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 AKR1B1P15121 316 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 TMEM132BQ14DG7 1078 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms