RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 DHX15O43143 795 aaKnown RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 SRGAP3O43295 1099 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 COBLO75128 1261 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 ADAMTS4O75173 837 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 SURF6O75683 361 aaKnown RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 RFX1P22670 979 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 IRAK1P51617 712 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 GP2P55259 537 aaKnown RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 OS9Q13438 667 aaPredicted RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 MTX1Q13505 466 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 SWI5Q1ZZU3 235 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 BEND3Q5T5X7 828 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 C16orf46Q6P387 395 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 KSR2Q6VAB6 950 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 MPRIPQ6WCQ1 1025 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 CLEC17AQ6ZS10 378 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 PPP1R42Q7Z4L9 355 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 CNTROBQ8N137 903 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 OTUD7AQ8TE49 926 aaPredicted RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 FOXD4L4Q8WXT5 416 aaPredicted RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 TNPO1Q92973 898 aaKnown RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 LRRC59Q96AG4 307 aaKnown RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 FAM46AQ96IP4 442 aaKnown RBP4.9□□□□□ -1.63
PTPN12-208ENST00000447995 PRIMPOLQ96LW4 560 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 CARD10Q9BWT7 1032 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 LACRTQ9GZZ8 138 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 C7orf69Q9H7B7 122 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 CHPF2Q9P2E5 772 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 STOML1Q9UBI4 398 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 ZMIZ1Q9ULJ6 1067 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 TTC41PQ6P2S7 1318 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 HEG1Q9ULI3 1381 aa4.9□□□□□ -1.63
PTPN12-208ENST00000447995 TNS3Q68CZ2 1445 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 PNMA6EA0A0J9YXQ4 647 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 PI4KAP2A4QPH2 592 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 UBAP1LF5GYI3 381 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 HIP1O00291 1037 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 PRMT3O60678 531 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 ADAM11O75078 769 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 GLRX3O76003 335 aaKnown RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 KIF4AO95239 1232 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CHMLP26374 656 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CDC27P30260 824 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CD68P34810 354 aaPredicted RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 XPCQ01831 940 aaPredicted RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 NEXNQ0ZGT2 675 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 NFIAQ12857 509 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 HYAL2Q12891 473 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CEP135Q66GS9 1140 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 KIAA1211Q6ZU35 1233 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 IFNL2Q8IZJ0 200 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 PI4KAP1Q8N8J0 262 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 LINS1Q8NG48 757 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 UBASH3BQ8TF42 649 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 RUFY2Q8WXA3 655 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 RILPL2Q969X0 211 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 UTP4Q969X6 686 aaKnown RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 IL17RAQ96F46 866 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 MYRFLQ96LU7 910 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CEP41Q9BYV8 373 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 RASSF4Q9H2L5 321 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 PHAXQ9H814 394 aaKnown RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 ANO2Q9NQ90 1003 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 DDX21Q9NR30 783 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 NLRP2Q9NX02 1062 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 C9orf78Q9NZ63 289 aaPredicted RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 USP42Q9H9J4 1324 aaKnown RBP4.89□□□□□ -1.63
PTPN12-208ENST00000447995 ALS2Q96Q42 1657 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 ADAMTS7Q9UKP4 1686 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 ADCY9O60503 1353 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 CPDO75976 1380 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 TMEM94Q12767 1356 aa4.89□□□□□ -1.63
PTPN12-208ENST00000447995 PXDNQ92626 1479 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 IFIT2P09913 472 aaKnown RBP4.88□□□□□ -1.63
PTPN12-208ENST00000447995 TAL1P17542 331 aaPredicted RBP4.88□□□□□ -1.63
PTPN12-208ENST00000447995 EPHA1P21709 976 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 BRD2P25440 801 aaKnown RBP4.88□□□□□ -1.63
PTPN12-208ENST00000447995 MRE11P49959 708 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 TTC5Q8N0Z6 440 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 STK32AQ8WU08 396 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 COL26A1Q96A83 441 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 SLC52A2Q9HAB3 445 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 MAP3K2Q9Y2U5 619 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 MRC1P22897 1456 aa4.88□□□□□ -1.63
PTPN12-208ENST00000447995 FSD2A1L4K1 749 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 PRR19A6NJB7 356 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 GRM8O00222 908 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 FSCN2O14926 492 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 KCNQ3O43525 872 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 SMNDC1O75940 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTPN12-208ENST00000447995 BAG4O95429 457 aaKnown RBP4.87□□□□□ -1.63
PTPN12-208ENST00000447995 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
PTPN12-208ENST00000447995 NBPF7P0C2Y1 421 aaPredicted RBP4.87□□□□□ -1.63
PTPN12-208ENST00000447995 PHKG2P15735 406 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 TXKP42681 527 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 NEK4P51957 841 aa4.87□□□□□ -1.63
PTPN12-208ENST00000447995 ZC3H6P61129 1189 aaKnown RBP4.87□□□□□ -1.63
PTPN12-208ENST00000447995 G3BP1Q13283 466 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTPN12-208ENST00000447995 RNF43Q68DV7 783 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms