RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TBC1D8O95759 1140 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 OSBPP22059 807 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 GPAT2Q6NUI2 795 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 RALYLQ86SE5 291 aaKnown RBP15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 IQCA1Q86XH1 822 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 CLEC10AQ8IUN9 316 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 LPAR1Q92633 364 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 EMILIN3Q9NT22 766 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 CLIP2Q9UDT6 1046 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 SYNPO2Q9UMS6 1093 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 STX8Q9UNK0 236 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 LAMA4Q16363 1823 aa15.44■□□□□ 0.06
ERGIC3-209ENST00000447986 IGKV6D-41A0A0C4DH26 115 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 A0A1W2PRG0 241 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 TCP11L1Q9NUJ3 509 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 NEDD4P46934 1319 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 RAD21O60216 631 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 KDM4AO75164 1064 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 ZKSCAN1P17029 563 aaPredicted RBP15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 IRX3P78415 501 aaPredicted RBP15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 CRHR2Q13324 411 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 TREML2Q5T2D2 321 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 NCOA7Q8NI08 942 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 SMCR8Q8TEV9 937 aaPredicted RBP15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 TSKSQ9UJT2 592 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 TACC3Q9Y6A5 838 aa15.43■□□□□ 0.06
ERGIC3-209ENST00000447986 B4E1Z4 1266 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 EPB41L2O43491 1005 aaKnown RBP15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 VCAM1P19320 739 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 HOXA7P31268 230 aaPredicted RBP15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 DGKZQ13574 1117 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 NECTIN1Q15223 517 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 SIAH1Q8IUQ4 282 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 MKL1Q969V6 931 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 TTC14Q96N46 770 aa15.42■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 E7EWF7 191 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 SLC27A2O14975 620 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 TLR2O60603 784 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 HSPA8P11142 646 aaKnown RBP15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 NOM1Q5C9Z4 860 aaKnown RBP15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 CREB3L3Q68CJ9 461 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 PTPRFP10586 1907 aa15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 GREB1LQ9C091 1923 aaPredicted RBP15.41■□□□□ 0.06
ERGIC3-209ENST00000447986 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
ERGIC3-209ENST00000447986 CYP2C8P10632 490 aa15.4■□□□□ 0.06
ERGIC3-209ENST00000447986 LBX1P52954 281 aa15.4■□□□□ 0.06
ERGIC3-209ENST00000447986 SPICE1Q8N0Z3 855 aa15.4■□□□□ 0.06
ERGIC3-209ENST00000447986 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
ERGIC3-209ENST00000447986 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
ERGIC3-209ENST00000447986 ERICH2A1L162 156 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 F5H6K3 240 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 GPR25O00155 361 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 NMT2O60551 498 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 KLRC3Q07444 240 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 SART3Q15020 963 aaKnown RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 DGKHQ86XP1 1220 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 LRRC47Q8N1G4 583 aaKnown RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 GMCL1P1Q8NEA9 526 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 ZSCAN10Q96SZ4 725 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 ASCC2Q9H1I8 757 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 TOP1P11387 765 aaKnown RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 MCCP23508 829 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 KRT32Q14532 448 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 CATSPERGQ6ZRH7 1159 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 ZKSCAN3Q9BRR0 538 aa15.39■□□□□ 0.05
ERGIC3-209ENST00000447986 FKTNO75072 461 aa15.38■□□□□ 0.05
ERGIC3-209ENST00000447986 NOVP48745 357 aa15.38■□□□□ 0.05
ERGIC3-209ENST00000447986 PRDM10Q9NQV6 1147 aa15.38■□□□□ 0.05
ERGIC3-209ENST00000447986 TNKSO95271 1327 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 NDUFB10O96000 172 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 HSPA4P34932 840 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 SP3Q02447 781 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 COG2Q14746 738 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 KIF22Q14807 665 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 SLFN13Q68D06 897 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 ZNF296Q8WUU4 475 aaPredicted RBP15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 R3HDMLQ9H3Y0 253 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 KAT14Q9H8E8 782 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 HOXC10Q9NYD6 342 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 CPA4Q9UI42 421 aa15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-209ENST00000447986 FLOT1O75955 427 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms