RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 PLA2G4DQ86XP0 818 aa22.37■■□□□ 1.17
FAM3A-215ENST00000447601 BPIFA3Q9BQP9 254 aa22.37■■□□□ 1.17
FAM3A-215ENST00000447601 TRIM5Q9C035 493 aa22.37■■□□□ 1.17
FAM3A-215ENST00000447601 ZNF75DP51815 510 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 NLRP12P59046 1061 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 SLC15A2Q16348 729 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 KRBA2Q6ZNG9 492 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 DHX40Q8IX18 779 aaKnown RBP22.36■■□□□ 1.17
FAM3A-215ENST00000447601 HOOK1Q9UJC3 728 aaKnown RBP22.36■■□□□ 1.17
FAM3A-215ENST00000447601 FAM205CA6NFA0 338 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 TRAPPC10P48553 1259 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 PICALMQ13492 652 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 EARS2Q5JPH6 523 aaKnown RBP22.36■■□□□ 1.17
FAM3A-215ENST00000447601 FAM177A1Q8N128 213 aaPredicted RBP22.36■■□□□ 1.17
FAM3A-215ENST00000447601 STAG2Q8N3U4 1231 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 CNNM3Q8NE01 707 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 TEKT1Q969V4 418 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 TUBE1Q9UJT0 475 aa22.36■■□□□ 1.17
FAM3A-215ENST00000447601 QSER1Q2KHR3 1735 aa22.35■■□□□ 1.17
FAM3A-215ENST00000447601 PALM3A6NDB9 673 aaPredicted RBP22.35■■□□□ 1.17
FAM3A-215ENST00000447601 PIBF1Q8WXW3 757 aa22.35■■□□□ 1.17
FAM3A-215ENST00000447601 USP40Q9NVE5 1235 aa22.35■■□□□ 1.17
FAM3A-215ENST00000447601 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
FAM3A-215ENST00000447601 PLIN4Q96Q06 1357 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 A0A087WWV3 80 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
FAM3A-215ENST00000447601 NOVP48745 357 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 KIAA2012Q0VF49 1180 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 DPCR1Q3MIW9 517 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 LONRF3Q496Y0 759 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 TTC38Q5R3I4 469 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
FAM3A-215ENST00000447601 FKBP1AP62942 108 aaKnown RBP22.34■■□□□ 1.17
FAM3A-215ENST00000447601 GRIN1Q05586 938 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 AOPEPQ8N6M6 819 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 CCDC148Q8NFR7 591 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 MXD3Q9BW11 206 aa22.34■■□□□ 1.17
FAM3A-215ENST00000447601 MYH6P13533 1939 aa22.33■■□□□ 1.17
FAM3A-215ENST00000447601 CDC25BP30305 580 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 GABPAQ06546 454 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 SPECC1Q5M775 1068 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 SPC24Q8NBT2 197 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 CEP95Q96GE4 821 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 SPZ1Q9BXG8 430 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 DBNDD1Q9H9R9 158 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 SWAP70Q9UH65 585 aa22.33■■□□□ 1.16
FAM3A-215ENST00000447601 CDK5RAP2Q96SN8 1893 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 BIN1O00499 593 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 SCNN1DP51172 638 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 GALNT17Q6IS24 598 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 BLIDQ8IZY5 108 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 CAMKK2Q96RR4 588 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 CSRNP2Q9H175 543 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 PCDHA4Q9UN74 947 aa22.32■■□□□ 1.16
FAM3A-215ENST00000447601 PARP1P09874 1014 aaKnown RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 EZH2Q15910 746 aaKnown RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 STRIP1Q5VSL9 837 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 PIK3AP1Q6ZUJ8 805 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 MRIQ9BWK5 157 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 DDX4Q9NQI0 724 aaKnown RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 KLRF2D3W0D1 207 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 VEGFAP15692 232 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 SMARCA1P28370 1054 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 PNOCQ13519 176 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 KANK3Q6NY19 840 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 CDC42EP5Q6NZY7 148 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 GPKOWQ92917 476 aaPredicted RBP eCLIP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 MRFAP1L1Q96HT8 127 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 OSBPL5Q9H0X9 879 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 TTC12Q9H892 705 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-215ENST00000447601 SERPINB13Q9UIV8 391 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 MTMR7Q9Y216 660 aa22.31■■□□□ 1.16
FAM3A-215ENST00000447601 POLR2DO15514 142 aaKnown RBP22.3■■□□□ 1.16
FAM3A-215ENST00000447601 CYTH3O43739 400 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 CRKP46108 304 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 TPM4P67936 248 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 ATP2C1P98194 919 aaPredicted RBP22.3■■□□□ 1.16
FAM3A-215ENST00000447601 ZNF174Q15697 407 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 APOBEC3HQ6NTF7 200 aaKnown RBP22.3■■□□□ 1.16
FAM3A-215ENST00000447601 DAGLBQ8NCG7 672 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 CCDC34Q96HJ3 373 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 ZDHHC15Q96MV8 337 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 BARHL2Q9NY43 387 aa22.3■■□□□ 1.16
FAM3A-215ENST00000447601 SMTNL1A8MU46 457 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 HLA-DOAP06340 250 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 SLC35G1Q2M3R5 365 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 NOM1Q5C9Z4 860 aaKnown RBP22.29■■□□□ 1.16
FAM3A-215ENST00000447601 WWC2Q6AWC2 1192 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 ZNF830Q96NB3 372 aaPredicted RBP22.29■■□□□ 1.16
FAM3A-215ENST00000447601 ECE2O60344 883 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 CHRNA5P30532 468 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 HDLBPQ00341 1268 aaKnown RBP22.29■■□□□ 1.16
FAM3A-215ENST00000447601 MDM2Q00987 491 aaPredicted RBP22.29■■□□□ 1.16
FAM3A-215ENST00000447601 EN1Q05925 392 aaPredicted RBP22.29■■□□□ 1.16
FAM3A-215ENST00000447601 CC2D2BQ6DHV5 1058 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms