RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 TJP2Q9UDY2 1190 aa2.22□□□□□ -2.05
SNHG3-203ENST00000447507 GPR160Q9UJ42 338 aa2.22□□□□□ -2.05
SNHG3-203ENST00000447507 KCNH3Q9ULD8 1083 aa2.22□□□□□ -2.05
SNHG3-203ENST00000447507 YBX2Q9Y2T7 364 aaKnown RBP2.22□□□□□ -2.05
SNHG3-203ENST00000447507 GFRA2O00451 464 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 TRIM13O60858 407 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 KRTAP10-9P60411 292 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 DUSP4Q13115 394 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 NFIXQ14938 502 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 SNX17Q15036 470 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 CCDC85BQ15834 202 aaPredicted RBP2.21□□□□□ -2.06
SNHG3-203ENST00000447507 TIGD5Q53EQ6 642 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 SPPL2CQ8IUH8 684 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 ZSCAN29Q8IWY8 852 aaPredicted RBP2.21□□□□□ -2.06
SNHG3-203ENST00000447507 ANKS4BQ8N8V4 417 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 CYB5D2Q8WUJ1 264 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 NAF1Q96HR8 494 aaKnown RBP2.21□□□□□ -2.06
SNHG3-203ENST00000447507 MENTQ9BUN1 341 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 ZNF552Q9H707 407 aaPredicted RBP2.21□□□□□ -2.06
SNHG3-203ENST00000447507 GCM1Q9NP62 436 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 ADAM30Q9UKF2 790 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 CEP131Q9UPN4 1083 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 GNEQ9Y223 722 aaKnown RBP2.21□□□□□ -2.06
SNHG3-203ENST00000447507 KCTD3Q9Y597 815 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 PCDHA11Q9Y5I1 949 aa2.21□□□□□ -2.06
SNHG3-203ENST00000447507 OR14I1A6ND48 311 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 RBAK-RBAKDNI3L0D1 243 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 SASH1O94885 1247 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 PI3P19957 117 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 EIF4BP23588 611 aaKnown RBP2.2□□□□□ -2.06
SNHG3-203ENST00000447507 LIG3P49916 1009 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 YARSP54577 528 aaKnown RBP2.2□□□□□ -2.06
SNHG3-203ENST00000447507 SSPNQ14714 243 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 TSNAXIP1Q2TAA8 658 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 ERICH6BQ5W0A0 696 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 DIEXFQ68CQ4 756 aaKnown RBP2.2□□□□□ -2.06
SNHG3-203ENST00000447507 MCATQ8IVS2 390 aaKnown RBP2.2□□□□□ -2.06
SNHG3-203ENST00000447507 MARCH10Q8NA82 808 aaPredicted RBP2.2□□□□□ -2.06
SNHG3-203ENST00000447507 FAM13CQ8NE31 585 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 PPP1R13LQ8WUF5 828 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 RNF141Q8WVD5 230 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 ACSF2Q96CM8 615 aaPredicted RBP2.2□□□□□ -2.06
SNHG3-203ENST00000447507 FRMD6Q96NE9 622 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 ASB16Q96NS5 453 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 SGPP1Q9BX95 441 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 MIR1-1HGQ9H1L0 117 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 WWC3Q9ULE0 1092 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 PCDHB5Q9Y5E4 795 aa2.2□□□□□ -2.06
SNHG3-203ENST00000447507 RBM47A0AV96 593 aaKnown RBP2.19□□□□□ -2.06
SNHG3-203ENST00000447507 HRKO00198 91 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 LDHBP07195 334 aaKnown RBP2.19□□□□□ -2.06
SNHG3-203ENST00000447507 GNA15P30679 374 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 AFF3P51826 1226 aaKnown RBP2.19□□□□□ -2.06
SNHG3-203ENST00000447507 TEKQ02763 1124 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 RPL6Q02878 288 aaKnown RBP2.19□□□□□ -2.06
SNHG3-203ENST00000447507 MAP3K11Q16584 847 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 ADGRF1Q5T601 910 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 AGMOQ6ZNB7 445 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 SP8Q8IXZ3 490 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 CXorf38Q8TB03 319 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 SHISA4Q96DD7 197 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 SIGLEC10Q96LC7 697 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 ASPNQ9BXN1 380 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 IRAK3Q9Y616 596 aa2.19□□□□□ -2.06
SNHG3-203ENST00000447507 SHISA3A0PJX4 238 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 LRRN2O75325 713 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 USP2O75604 605 aaPredicted RBP2.18□□□□□ -2.06
SNHG3-203ENST00000447507 BRD1O95696 1058 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 P4HBP07237 508 aaKnown RBP2.18□□□□□ -2.06
SNHG3-203ENST00000447507 CELA3BP08861 270 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 RLBP1P12271 317 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 PLCG1P19174 1290 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 TFE3P19532 575 aaPredicted RBP2.18□□□□□ -2.06
SNHG3-203ENST00000447507 TNNI2P48788 182 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 EPHB3P54753 998 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 SRSF3P84103 164 aaKnown RBP2.18□□□□□ -2.06
SNHG3-203ENST00000447507 CLEC16AQ2KHT3 1053 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 SKOR2Q2VWA4 1001 aaPredicted RBP2.18□□□□□ -2.06
SNHG3-203ENST00000447507 OLFML2BQ68BL8 750 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 NLRX1Q86UT6 975 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 LINC01599Q8WXQ3 324 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 G6PC3Q9BUM1 346 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 XYLT2Q9H1B5 865 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 SIRT5Q9NXA8 310 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 MBD1Q9UIS9 605 aaPredicted RBP2.18□□□□□ -2.06
SNHG3-203ENST00000447507 CORINQ9Y5Q5 1042 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 GTF3C3Q9Y5Q9 886 aa2.18□□□□□ -2.06
SNHG3-203ENST00000447507 OTOL1A6NHN0 477 aaPredicted RBP2.17□□□□□ -2.06
SNHG3-203ENST00000447507 SLC22A31A6NKX4 558 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 NOTOA8MTQ0 251 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 UPK3BL1B0FP48 263 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 UPK3BL2E5RIL1 263 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 IRS4O14654 1257 aaPredicted RBP2.17□□□□□ -2.06
SNHG3-203ENST00000447507 N4BP3O15049 544 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 NRDCO43847 1150 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 PRPF40AO75400 957 aaKnown RBP2.17□□□□□ -2.06
SNHG3-203ENST00000447507 BPNT1O95861 308 aa2.17□□□□□ -2.06
SNHG3-203ENST00000447507 KIR2DL1P43626 348 aaPredicted RBP2.17□□□□□ -2.06
SNHG3-203ENST00000447507 KIR2DL2P43627 348 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms