RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CAP1Q01518 475 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 AKNAD1Q5T1N1 836 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
RFC4-208ENST00000447345 CTU1Q7Z7A3 348 aaKnown RBP14.11□□□□□ -0.15
RFC4-208ENST00000447345 NEDD1Q8NHV4 660 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 STAG1Q8WVM7 1258 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 ARHGAP39Q9C0H5 1083 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 VCPKMTQ9H867 229 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 GOPCQ9HD26 462 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 CLIP2Q9UDT6 1046 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 CTNNA3Q9UI47 895 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 TRIM17Q9Y577 477 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 USP17L15C9J2P7 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L13C9JLJ4 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L11C9JVI0 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L18D6R9N7 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L22D6RA61 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L17D6RBQ6 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L19D6RCP7 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L20D6RJB6 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 BCRP11274 1271 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 HERVK_113P62684 666 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 USP17L24Q0WX57 530 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 CASC1Q6TDU7 716 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 P2RX7Q99572 595 aaKnown RBP14.1□□□□□ -0.15
RFC4-208ENST00000447345 PAGR1Q9BTK6 254 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 MCOLN1Q9GZU1 580 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 RNF41Q9H4P4 317 aaPredicted RBP14.1□□□□□ -0.15
RFC4-208ENST00000447345 ANO2Q9NQ90 1003 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 MTMR4Q9NYA4 1195 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 ISY1Q9ULR0 285 aaKnown RBP14.1□□□□□ -0.15
RFC4-208ENST00000447345 STX8Q9UNK0 236 aa14.1□□□□□ -0.15
RFC4-208ENST00000447345 TTLL1O95922 423 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 FGRP09769 529 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 HOXA7P31268 230 aaPredicted RBP14.09□□□□□ -0.15
RFC4-208ENST00000447345 LACTBP83111 547 aaPredicted RBP14.09□□□□□ -0.15
RFC4-208ENST00000447345 KIF22Q14807 665 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 LPAR1Q92633 364 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 NUP88Q99567 741 aaPredicted RBP14.09□□□□□ -0.15
RFC4-208ENST00000447345 IL17RBQ9NRM6 502 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 NYAP2Q9P242 653 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
RFC4-208ENST00000447345 RBM8AQ9Y5S9 174 aaKnown RBP14.09□□□□□ -0.15
RFC4-208ENST00000447345 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
RFC4-208ENST00000447345 B4E1Z4 1266 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 WDR46O15213 610 aaKnown RBP14.08□□□□□ -0.16
RFC4-208ENST00000447345 NDUFB10O96000 172 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 CTGFP29279 349 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 GCLCP48506 637 aaPredicted RBP14.08□□□□□ -0.16
RFC4-208ENST00000447345 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 CATSPERGQ6ZRH7 1159 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 OTOP1Q7RTM1 612 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 ESR2Q92731 530 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 ZKSCAN3Q9BRR0 538 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 LSG1Q9H089 658 aaKnown RBP14.08□□□□□ -0.16
RFC4-208ENST00000447345 EFCC1Q9HA90 598 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.16
RFC4-208ENST00000447345 MYH6P13533 1939 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 F5H6K3 240 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 KDM4AO75164 1064 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 FLOT1O75955 427 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 FMNL1O95466 1100 aaPredicted RBP14.07□□□□□ -0.16
RFC4-208ENST00000447345 CYP21A2P08686 494 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
RFC4-208ENST00000447345 PSMC4P43686 418 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 KLRC3Q07444 240 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 FAM110CQ1W6H9 321 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 RASGRP2Q7LDG7 609 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 TRIM47Q96LD4 638 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 TXNRD2Q9NNW7 524 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 FBXO28Q9NVF7 368 aa14.07□□□□□ -0.16
RFC4-208ENST00000447345 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
RFC4-208ENST00000447345 FCGRTP55899 365 aa14.06□□□□□ -0.16
RFC4-208ENST00000447345 MAP4K1Q92918 833 aa14.06□□□□□ -0.16
RFC4-208ENST00000447345 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
RFC4-208ENST00000447345 HTTP42858 3142 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 TNPO2O14787 897 aaKnown RBP14.05□□□□□ -0.16
RFC4-208ENST00000447345 SLFN13Q68D06 897 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 POTEEQ6S8J3 1075 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 MKL1Q969V6 931 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 ATG4CQ96DT6 458 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 KRT23Q9C075 422 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 CNNM2Q9H8M5 875 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 RBPJLQ9UBG7 517 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 PLXNA1Q9UIW2 1896 aa14.05□□□□□ -0.16
RFC4-208ENST00000447345 E7EWF7 191 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 CAPN15O75808 1086 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 CNMDO75829 334 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 ERVK-24P63145 666 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 TRDNQ13061 729 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 COG2Q14746 738 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 ARHGEF6Q15052 776 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 CCDC96Q2M329 555 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 STOX1Q6ZVD7 989 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 RALYLQ86SE5 291 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms