RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 PFKFB2O60825 505 aa12.74□□□□□ -0.37
PTCH2-203ENST00000447098 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 H2AFXP16104 143 aaPredicted RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 CCDC178Q5BJE1 867 aa12.74□□□□□ -0.37
PTCH2-203ENST00000447098 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
PTCH2-203ENST00000447098 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
PTCH2-203ENST00000447098 SUPT20HQ8NEM7 779 aa12.74□□□□□ -0.37
PTCH2-203ENST00000447098 BAG1Q99933 345 aaPredicted RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 C6orf50Q9HD87 102 aa12.74□□□□□ -0.37
PTCH2-203ENST00000447098 PUF60Q9UHX1 559 aaKnown RBP12.74□□□□□ -0.37
PTCH2-203ENST00000447098 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 AOC3Q16853 763 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 SH3RF3Q8TEJ3 882 aaPredicted RBP12.73□□□□□ -0.37
PTCH2-203ENST00000447098 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 SMARCE1Q969G3 411 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 USP42Q9H9J4 1324 aaKnown RBP12.73□□□□□ -0.37
PTCH2-203ENST00000447098 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 BTBD18B2RXH4 712 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 KIF5CO60282 957 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
PTCH2-203ENST00000447098 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 FNBP4Q8N3X1 1017 aaPredicted RBP12.73□□□□□ -0.37
PTCH2-203ENST00000447098 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 STAMQ92783 540 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 PLA2G12BQ9BX93 195 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 UTYO14607 1347 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 GYS2P54840 703 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 SP4Q02446 784 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
PTCH2-203ENST00000447098 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 KCNB2Q92953 911 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 L2HGDHQ9H9P8 463 aa12.73□□□□□ -0.37
PTCH2-203ENST00000447098 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 PHACTR2O75167 634 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 GDF11O95390 407 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 COL9A3Q14050 684 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ZNF274Q96GC6 653 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-203ENST00000447098 RAB34Q9BZG1 259 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-203ENST00000447098 HOMER2Q9NSB8 354 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 NMT2O60551 498 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 IVLP07476 585 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 CALML3P27482 149 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
PTCH2-203ENST00000447098 GPR162Q16538 588 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ANO1Q5XXA6 986 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 PPP2R2CQ9Y2T4 447 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 CLIC4Q9Y696 253 aa12.72□□□□□ -0.37
PTCH2-203ENST00000447098 ATP8B1O43520 1251 aa12.71□□□□□ -0.37
PTCH2-203ENST00000447098 STOX1Q6ZVD7 989 aa12.71□□□□□ -0.37
PTCH2-203ENST00000447098 BRAPQ7Z569 592 aa12.71□□□□□ -0.37
PTCH2-203ENST00000447098 RBM28Q9NW13 759 aaKnown RBP12.71□□□□□ -0.37
PTCH2-203ENST00000447098 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
PTCH2-203ENST00000447098 SEMA3EO15041 775 aa12.71□□□□□ -0.37
PTCH2-203ENST00000447098 GYS1P13807 737 aa12.71□□□□□ -0.37
PTCH2-203ENST00000447098 NFAT5O94916 1531 aa12.71□□□□□ -0.37
PTCH2-203ENST00000447098 PEAK1Q9H792 1746 aa12.71□□□□□ -0.38
PTCH2-203ENST00000447098 STX17P56962 302 aa12.71□□□□□ -0.38
PTCH2-203ENST00000447098 COL23A1Q86Y22 540 aaPredicted RBP12.71□□□□□ -0.38
PTCH2-203ENST00000447098 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.38
PTCH2-203ENST00000447098 ZNF609O15014 1411 aa12.71□□□□□ -0.38
PTCH2-203ENST00000447098 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.38
PTCH2-203ENST00000447098 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.38
PTCH2-203ENST00000447098 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.38
PTCH2-203ENST00000447098 FEZ2Q9UHY8 353 aaPredicted RBP12.71□□□□□ -0.38
PTCH2-203ENST00000447098 TNS2Q63HR2 1409 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 KLRF2D3W0D1 207 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 STAT6P42226 847 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 EAPPQ56P03 285 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-203ENST00000447098 CALML4Q96GE6 196 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 NEDD4P46934 1319 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 MED23Q9ULK4 1368 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 PFKFB1P16118 471 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 CASP7P55210 303 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 ENOX2Q16206 610 aaKnown RBP12.7□□□□□ -0.38
PTCH2-203ENST00000447098 CC2D1AQ6P1N0 951 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-203ENST00000447098 FMR1NBQ8N0W7 255 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-203ENST00000447098 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 GBP3Q9H0R5 595 aa12.7□□□□□ -0.38
PTCH2-203ENST00000447098 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-203ENST00000447098 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms