RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 USP17L11C9JVI0 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L18D6R9N7 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L22D6RA61 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L17D6RBQ6 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L19D6RCP7 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L20D6RJB6 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 USP17L24Q0WX57 530 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 NECTIN1Q15223 517 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 RRP12Q5JTH9 1297 aaKnown RBP25.96■■□□□ 1.75
APOE-204ENST00000446996 TTC14Q96N46 770 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 IL17RBQ9NRM6 502 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 CLIP2Q9UDT6 1046 aa25.96■■□□□ 1.75
APOE-204ENST00000446996 NEDD4P46934 1319 aa25.95■■□□□ 1.75
APOE-204ENST00000446996 VCAM1P19320 739 aa25.95■■□□□ 1.74
APOE-204ENST00000446996 ATP2B2Q01814 1243 aa25.95■■□□□ 1.74
APOE-204ENST00000446996 DGKZQ13574 1117 aa25.95■■□□□ 1.74
APOE-204ENST00000446996 ZYXQ15942 572 aaKnown RBP25.95■■□□□ 1.74
APOE-204ENST00000446996 C17orf99Q6UX52 265 aa25.95■■□□□ 1.74
APOE-204ENST00000446996 CATSPERGQ6ZRH7 1159 aa25.95■■□□□ 1.74
APOE-204ENST00000446996 GTF3C2Q8WUA4 911 aaPredicted RBP25.95■■□□□ 1.74
APOE-204ENST00000446996 CASP8AP2Q9UKL3 1982 aa25.95■■□□□ 1.74
APOE-204ENST00000446996 WDR46O15213 610 aaKnown RBP25.94■■□□□ 1.74
APOE-204ENST00000446996 FKTNO75072 461 aa25.94■■□□□ 1.74
APOE-204ENST00000446996 GCLCP48506 637 aaPredicted RBP25.94■■□□□ 1.74
APOE-204ENST00000446996 IRX3P78415 501 aaPredicted RBP25.94■■□□□ 1.74
APOE-204ENST00000446996 TRDNQ13061 729 aa25.94■■□□□ 1.74
APOE-204ENST00000446996 ASCC2Q9H1I8 757 aaPredicted RBP25.94■■□□□ 1.74
APOE-204ENST00000446996 REC8O95072 547 aa25.93■■□□□ 1.74
APOE-204ENST00000446996 CYP2C8P10632 490 aa25.93■■□□□ 1.74
APOE-204ENST00000446996 BCRP11274 1271 aa25.92■■□□□ 1.74
APOE-204ENST00000446996 SP3Q02447 781 aa25.92■■□□□ 1.74
APOE-204ENST00000446996 RNF20Q5VTR2 975 aa25.92■■□□□ 1.74
APOE-204ENST00000446996 IQCA1Q86XH1 822 aa25.92■■□□□ 1.74
APOE-204ENST00000446996 GMCL1P1Q8NEA9 526 aa25.92■■□□□ 1.74
APOE-204ENST00000446996 SMCR8Q8TEV9 937 aaPredicted RBP25.92■■□□□ 1.74
APOE-204ENST00000446996 ZNF296Q8WUU4 475 aaPredicted RBP25.92■■□□□ 1.74
APOE-204ENST00000446996 B4E1Z4 1266 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 E7EWF7 191 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 F5H6K3 240 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 EIF5BO60841 1220 aaKnown RBP25.91■■□□□ 1.74
APOE-204ENST00000446996 KDM4AO75164 1064 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 KLRC3Q07444 240 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 LBX2Q6XYB7 198 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 DGKHQ86XP1 1220 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 NCOA7Q8NI08 942 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 RPAP3Q9H6T3 665 aaPredicted RBP25.91■■□□□ 1.74
APOE-204ENST00000446996 ZSWIM5Q9P217 1185 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 STX8Q9UNK0 236 aa25.91■■□□□ 1.74
APOE-204ENST00000446996 MYPNQ86TC9 1320 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 SLC27A2O14975 620 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 TSGA10IPQ3SY00 556 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 KIAA1755Q5JYT7 1200 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 CREB3L3Q68CJ9 461 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 ANKS1AQ92625 1134 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 ERO1AQ96HE7 468 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 P2RX7Q99572 595 aaKnown RBP25.9■■□□□ 1.74
APOE-204ENST00000446996 HOXC10Q9NYD6 342 aa25.9■■□□□ 1.74
APOE-204ENST00000446996 NMT2O60551 498 aa25.89■■□□□ 1.74
APOE-204ENST00000446996 TOP1P11387 765 aaKnown RBP25.89■■□□□ 1.74
APOE-204ENST00000446996 HERVK_113P62684 666 aa25.89■■□□□ 1.74
APOE-204ENST00000446996 COG2Q14746 738 aa25.89■■□□□ 1.74
APOE-204ENST00000446996 ARHGEF6Q15052 776 aa25.88■■□□□ 1.73
APOE-204ENST00000446996 FAM110CQ1W6H9 321 aa25.88■■□□□ 1.73
APOE-204ENST00000446996 RALYLQ86SE5 291 aaKnown RBP25.88■■□□□ 1.73
APOE-204ENST00000446996 MTA3Q9BTC8 594 aa25.88■■□□□ 1.73
APOE-204ENST00000446996 CPA4Q9UI42 421 aa25.88■■□□□ 1.73
APOE-204ENST00000446996 RLFQ13129 1914 aa25.87■■□□□ 1.73
APOE-204ENST00000446996 NDUFB10O96000 172 aa25.87■■□□□ 1.73
APOE-204ENST00000446996 RCSD1Q6JBY9 416 aa25.87■■□□□ 1.73
APOE-204ENST00000446996 SPICE1Q8N0Z3 855 aa25.87■■□□□ 1.73
APOE-204ENST00000446996 NKX2-3Q8TAU0 364 aa25.87■■□□□ 1.73
APOE-204ENST00000446996 ZSCAN10Q96SZ4 725 aaPredicted RBP25.87■■□□□ 1.73
APOE-204ENST00000446996 MORF4L1Q9UBU8 362 aa25.87■■□□□ 1.73
APOE-204ENST00000446996 CAPN15O75808 1086 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 SLFN13Q68D06 897 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 STOX1Q6ZVD7 989 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 KCNB2Q92953 911 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 GMCL1Q96IK5 515 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 TMEM47Q9BQJ4 181 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 PARP14Q460N5 1801 aa25.86■■□□□ 1.73
APOE-204ENST00000446996 ZKSCAN1P17029 563 aaPredicted RBP25.85■■□□□ 1.73
APOE-204ENST00000446996 DSG3P32926 999 aa25.85■■□□□ 1.73
APOE-204ENST00000446996 KIF22Q14807 665 aa25.85■■□□□ 1.73
APOE-204ENST00000446996 LRRC47Q8N1G4 583 aaKnown RBP25.85■■□□□ 1.73
APOE-204ENST00000446996 UBAC1Q9BSL1 405 aa25.85■■□□□ 1.73
APOE-204ENST00000446996 TANGO6Q9C0B7 1094 aa25.85■■□□□ 1.73
APOE-204ENST00000446996 RABGAP1Q9Y3P9 1069 aa25.85■■□□□ 1.73
APOE-204ENST00000446996 TAF6LQ9Y6J9 622 aa25.85■■□□□ 1.73
APOE-204ENST00000446996 SPDYE16A6NNV3 312 aaPredicted RBP25.84■■□□□ 1.73
APOE-204ENST00000446996 GNRH1P01148 92 aa25.84■■□□□ 1.73
APOE-204ENST00000446996 LACTBP83111 547 aaPredicted RBP25.84■■□□□ 1.73
APOE-204ENST00000446996 KRT32Q14532 448 aa25.84■■□□□ 1.73
APOE-204ENST00000446996 MB21D2Q8IYB1 491 aaPredicted RBP25.84■■□□□ 1.73
APOE-204ENST00000446996 MB21D1Q8N884 522 aa25.84■■□□□ 1.73
APOE-204ENST00000446996 PLA2G6O60733 806 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 FLOT1O75955 427 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 BMP3P12645 472 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 HSPA4P34932 840 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 FAM83BQ5T0W9 1011 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 CYB5R4Q7L1T6 521 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms