RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ANKS3Q6ZW76 656 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 MFSD4AQ8N468 514 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 KLHL6Q8WZ60 621 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 DHRS1Q96LJ7 313 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 DRC1Q96MC2 740 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 PHAXQ9H814 394 aaKnown RBP6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 ACTR10Q9NZ32 417 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 FAM86C2PA6NEL3 165 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 LRRN2O75325 713 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 GTF2F1P35269 517 aaKnown RBP eCLIP6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 CD97P48960 835 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 RNF4P78317 190 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 TNK2Q07912 1038 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 DTWD2Q8NBA8 298 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 PIWIL2Q8TC59 973 aaKnown RBP6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 HNRNPLLQ8WVV9 542 aaKnown RBP6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 LRRC4CQ9HCJ2 640 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 ST14Q9Y5Y6 855 aa6.8□□□□□ -1.32
HMGB1P48-201ENST00000446155 KIAA1324LA8MWY0 1029 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 SHOXO15266 292 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 SRFP11831 508 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 HSP90B1P14625 803 aaKnown RBP6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 SPINK2P20155 84 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 SERINC3Q13530 473 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 RAB33AQ14088 237 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 NBPF6Q5VWK0 638 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 INTS5Q6P9B9 1019 aaKnown RBP6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 MICAL1Q8TDZ2 1067 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 ZNF512BQ96KM6 892 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 NBPF4Q96M43 638 aa6.79□□□□□ -1.32
HMGB1P48-201ENST00000446155 GNAT3A8MTJ3 354 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 COBLO75128 1261 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 CBX7O95931 251 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 CLCN7P51798 805 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 PPP2R5EQ16537 467 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 IFI16Q16666 785 aaKnown RBP6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 AXDND1Q5T1B0 1012 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 WFDC3Q8IUB2 231 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 CELF2-AS1Q8N7Q2 184 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 UBXN4Q92575 508 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 PUS7Q96PZ0 661 aaKnown RBP6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 HIRIP3Q9BW71 556 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 DUSP15Q9H1R2 295 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 SEMA3GQ9NS98 782 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 PCDHB10Q9UN67 800 aa6.78□□□□□ -1.32
HMGB1P48-201ENST00000446155 PRNPP04156 253 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 ITIH2P19823 946 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 BBS9Q3SYG4 887 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 TDRD10Q5VZ19 366 aaKnown RBP6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 NFXL1Q6ZNB6 911 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 DTX1Q86Y01 620 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 GPR62Q9BZJ7 368 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 SNX11Q9Y5W9 270 aa6.77□□□□□ -1.33
HMGB1P48-201ENST00000446155 PITPNM2Q9BZ72 1349 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 TMEM265A0A087WTH1 108 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 B2RBV5 119 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 GRIK1P39086 918 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 SLC7A5Q01650 507 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 SNW1Q13573 536 aaKnown RBP6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 AUHQ13825 339 aaKnown RBP6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 MRM1Q6IN84 353 aaKnown RBP6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 C6orf15Q6UXA7 325 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 C7orf61Q8IZ16 206 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 KLHL25Q9H0H3 589 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 PRR13Q9NZ81 148 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 MSRB2Q9Y3D2 182 aa6.76□□□□□ -1.33
HMGB1P48-201ENST00000446155 SHISA3A0PJX4 238 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 NCAPHQ15003 741 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 FXNQ16595 210 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 DDR2Q16832 855 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 GAB4Q2WGN9 574 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 GNPTABQ3T906 1256 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 LARP1BQ659C4 914 aaKnown RBP6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 DCAF15Q66K64 600 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 VHLLQ6RSH7 139 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 THAP5Q7Z6K1 395 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 FAM178BQ8IXR5 827 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 ZNF513Q8N8E2 541 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 HAUS7Q99871 368 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 PRDM14Q9GZV8 571 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 MKRN2Q9H000 416 aaKnown RBP6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 KCNH3Q9ULD8 1083 aa6.75□□□□□ -1.33
HMGB1P48-201ENST00000446155 FAM155AB1AL88 458 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 GJB6O95452 261 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 TMC3Q7Z5M5 1100 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 CCDC144CPQ8IYA2 1237 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 MISP3Q96FF7 219 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 HSPA12BQ96MM6 686 aa6.74□□□□□ -1.33
HMGB1P48-201ENST00000446155 DNAJC2Q99543 621 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms