RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 EN2P19622 333 aaPredicted RBP17.6■□□□□ 0.41
USE1-202ENST00000445667 ERVK-9P63128 1117 aa17.6■□□□□ 0.41
USE1-202ENST00000445667 ERVK-24P63145 666 aa17.6■□□□□ 0.41
USE1-202ENST00000445667 NMIQ13287 307 aaPredicted RBP17.6■□□□□ 0.41
USE1-202ENST00000445667 ZNF444Q8N0Y2 327 aaPredicted RBP17.6■□□□□ 0.41
USE1-202ENST00000445667 GTF3C2Q8WUA4 911 aaPredicted RBP17.6■□□□□ 0.41
USE1-202ENST00000445667 VCPKMTQ9H867 229 aa17.6■□□□□ 0.41
USE1-202ENST00000445667 RABGAP1Q9Y3P9 1069 aa17.6■□□□□ 0.41
USE1-202ENST00000445667 SPDYE16A6NNV3 312 aaPredicted RBP17.59■□□□□ 0.41
USE1-202ENST00000445667 PDE4AP27815 886 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 PPARAQ07869 468 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 MCMDC2Q4G0Z9 681 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 TANGO6Q9C0B7 1094 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 PORCNQ9H237 461 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 SH2D4AQ9H788 454 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
USE1-202ENST00000445667 RAD21O60216 631 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 SDSP20132 328 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 IRF5Q13568 498 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 COG2Q14746 738 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.4
USE1-202ENST00000445667 CCAR1Q8IX12 1150 aaKnown RBP17.58■□□□□ 0.4
USE1-202ENST00000445667 LPAR1Q92633 364 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 BTBD7Q9P203 1132 aa17.58■□□□□ 0.4
USE1-202ENST00000445667 PDE4BQ07343 736 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
USE1-202ENST00000445667 LBX2Q6XYB7 198 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 TICAM2Q86XR7 235 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 PXYLP1Q8TE99 480 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 HOXC10Q9NYD6 342 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
USE1-202ENST00000445667 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
USE1-202ENST00000445667 CCL5P13501 91 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 CYP2B6P20813 491 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 MAPK4P31152 587 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 UBXN2AP68543 259 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 NYAP2Q9P242 653 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
USE1-202ENST00000445667 WDR46O15213 610 aaKnown RBP17.55■□□□□ 0.4
USE1-202ENST00000445667 FLOT1O75955 427 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 FGAP02671 866 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 INHAP05111 366 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 HSPD1P10809 573 aaKnown RBP17.55■□□□□ 0.4
USE1-202ENST00000445667 DSG3P32926 999 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 CCNA1P78396 465 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 TFAP4Q01664 338 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 ALX1Q15699 326 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 WDR78Q5VTH9 848 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 PLEKHH3Q7Z736 793 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 CWC22Q9HCG8 908 aaKnown RBP17.55■□□□□ 0.4
USE1-202ENST00000445667 GOPCQ9HD26 462 aa17.55■□□□□ 0.4
USE1-202ENST00000445667 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 FAM83BQ5T0W9 1011 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 CWC27Q6UX04 472 aaKnown RBP17.54■□□□□ 0.4
USE1-202ENST00000445667 NEDD1Q8NHV4 660 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 CEP95Q96GE4 821 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 FBXO28Q9NVF7 368 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
USE1-202ENST00000445667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
USE1-202ENST00000445667 TNRC18O15417 2968 aaPredicted RBP17.53■□□□□ 0.4
USE1-202ENST00000445667 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
USE1-202ENST00000445667 F5H6K3 240 aa17.53■□□□□ 0.4
USE1-202ENST00000445667 KLRC3Q07444 240 aa17.53■□□□□ 0.4
USE1-202ENST00000445667 MORN1Q5T089 497 aa17.53■□□□□ 0.4
USE1-202ENST00000445667 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
USE1-202ENST00000445667 DIAPH3Q9NSV4 1193 aa17.53■□□□□ 0.4
USE1-202ENST00000445667 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
USE1-202ENST00000445667 BRCA2P51587 3418 aa17.53■□□□□ 0.4
USE1-202ENST00000445667 PLXNB2O15031 1838 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 GSPT1P15170 499 aaKnown RBP17.52■□□□□ 0.4
USE1-202ENST00000445667 TRIM32Q13049 653 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 PLS1Q14651 629 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 TTC22Q5TAA0 569 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 USP6NLQ92738 828 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 MKL1Q969V6 931 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 MOV10L1Q9BXT6 1211 aaKnown RBP17.52■□□□□ 0.4
USE1-202ENST00000445667 SPATC1LQ9H0A9 340 aa17.52■□□□□ 0.4
USE1-202ENST00000445667 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
USE1-202ENST00000445667 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
USE1-202ENST00000445667 RANBP6O60518 1105 aaKnown RBP17.51■□□□□ 0.39
USE1-202ENST00000445667 TTLL1O95922 423 aa17.51■□□□□ 0.39
USE1-202ENST00000445667 NDUFB10O96000 172 aa17.51■□□□□ 0.39
USE1-202ENST00000445667 HMGCRP04035 888 aa17.51■□□□□ 0.39
USE1-202ENST00000445667 GJB1P08034 283 aa17.51■□□□□ 0.39
USE1-202ENST00000445667 HAND2P61296 217 aa17.51■□□□□ 0.39
USE1-202ENST00000445667 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms