RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 INCENPQ9NQS7 918 aa18.26■□□□□ 0.51
SEC22C-208ENST00000445388 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
SEC22C-208ENST00000445388 ERVK-24P63145 666 aa18.25■□□□□ 0.51
SEC22C-208ENST00000445388 CTDSPL2Q05D32 466 aa18.25■□□□□ 0.51
SEC22C-208ENST00000445388 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
SEC22C-208ENST00000445388 PORCNQ9H237 461 aa18.25■□□□□ 0.51
SEC22C-208ENST00000445388 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
SEC22C-208ENST00000445388 TACC3Q9Y6A5 838 aa18.25■□□□□ 0.51
SEC22C-208ENST00000445388 CENPFP49454 3210 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 SPDYE16A6NNV3 312 aaPredicted RBP18.24■□□□□ 0.51
SEC22C-208ENST00000445388 ADCY3O60266 1144 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 ELNP15502 786 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 MTFR1Q15390 333 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 TANGO6Q9C0B7 1094 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 BTBD7Q9P203 1132 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 GJD2Q9UKL4 321 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
SEC22C-208ENST00000445388 IGKV6D-41A0A0C4DH26 115 aa18.23■□□□□ 0.51
SEC22C-208ENST00000445388 EN2P19622 333 aaPredicted RBP18.23■□□□□ 0.51
SEC22C-208ENST00000445388 COG2Q14746 738 aa18.23■□□□□ 0.51
SEC22C-208ENST00000445388 FAM47AQ5JRC9 791 aa18.23■□□□□ 0.51
SEC22C-208ENST00000445388 TICAM2Q86XR7 235 aa18.23■□□□□ 0.51
SEC22C-208ENST00000445388 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
SEC22C-208ENST00000445388 TMEM106CQ9BVX2 250 aa18.23■□□□□ 0.51
SEC22C-208ENST00000445388 SH2D4AQ9H788 454 aa18.23■□□□□ 0.51
SEC22C-208ENST00000445388 BIN2Q9UBW5 565 aaPredicted RBP18.23■□□□□ 0.51
SEC22C-208ENST00000445388 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
SEC22C-208ENST00000445388 DOCK3Q8IZD9 2030 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 RAD21O60216 631 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 FGAP02671 866 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 HSPD1P10809 573 aaKnown RBP18.22■□□□□ 0.51
SEC22C-208ENST00000445388 PDE4BQ07343 736 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 IRF5Q13568 498 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 ALX1Q15699 326 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
SEC22C-208ENST00000445388 LBX2Q6XYB7 198 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 SLAIN1Q8ND83 568 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 LPAR1Q92633 364 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 ZNF287Q9HBT7 754 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 NYAP2Q9P242 653 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
SEC22C-208ENST00000445388 SLC3A2P08195 630 aaKnown RBP18.21■□□□□ 0.51
SEC22C-208ENST00000445388 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.51
SEC22C-208ENST00000445388 DSG3P32926 999 aa18.21■□□□□ 0.51
SEC22C-208ENST00000445388 TFAP4Q01664 338 aa18.21■□□□□ 0.51
SEC22C-208ENST00000445388 CWC27Q6UX04 472 aaKnown RBP18.21■□□□□ 0.51
SEC22C-208ENST00000445388 CEP95Q96GE4 821 aa18.21■□□□□ 0.51
SEC22C-208ENST00000445388 HOXC10Q9NYD6 342 aa18.21■□□□□ 0.51
SEC22C-208ENST00000445388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
SEC22C-208ENST00000445388 WDR46O15213 610 aaKnown RBP18.2■□□□□ 0.5
SEC22C-208ENST00000445388 FLOT1O75955 427 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 TSPY3P0CV98 308 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 TSPY8P0CW00 308 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 MAPK4P31152 587 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 TTC22Q5TAA0 569 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 GPR142Q7Z601 462 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 CCAR1Q8IX12 1150 aaKnown RBP18.2■□□□□ 0.5
SEC22C-208ENST00000445388 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 PXYLP1Q8TE99 480 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
SEC22C-208ENST00000445388 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 DIAPH3Q9NSV4 1193 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 FBXO28Q9NVF7 368 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 PLXNB2O15031 1838 aa18.2■□□□□ 0.5
SEC22C-208ENST00000445388 RLFQ13129 1914 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 F5H6K3 240 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 CCL5P13501 91 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 CYP2B6P20813 491 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 KLRC3Q07444 240 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 PLEKHH3Q7Z736 793 aa18.19■□□□□ 0.5
SEC22C-208ENST00000445388 INHAP05111 366 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 HAND2P61296 217 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 UBXN2AP68543 259 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 TRIM32Q13049 653 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 WDR78Q5VTH9 848 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 MKL1Q969V6 931 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 UNC93B1Q9H1C4 597 aa18.18■□□□□ 0.5
SEC22C-208ENST00000445388 RBBP6Q7Z6E9 1792 aaKnown RBP18.17■□□□□ 0.5
SEC22C-208ENST00000445388 NMT2O60551 498 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 NDUFB10O96000 172 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 CCNA1P78396 465 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 MORN1Q5T089 497 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
SEC22C-208ENST00000445388 USP6NLQ92738 828 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
SEC22C-208ENST00000445388 RNF208Q9H0X6 261 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 IL25Q9H293 177 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
SEC22C-208ENST00000445388 IL17RBQ9NRM6 502 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
SEC22C-208ENST00000445388 TSPY2A6NKD2 308 aa18.16■□□□□ 0.5
SEC22C-208ENST00000445388 HIP1O00291 1037 aa18.16■□□□□ 0.5
SEC22C-208ENST00000445388 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
SEC22C-208ENST00000445388 TTLL1O95922 423 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms