RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 NKD1Q969G9 470 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
VPS50-206ENST00000443443 SPON2Q9BUD6 331 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 LRRC3Q9BY71 257 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 GPR62Q9BZJ7 368 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 ASCC2Q9H1I8 757 aaPredicted RBP7.8□□□□□ -1.16
VPS50-206ENST00000443443 RGS13O14921 159 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
VPS50-206ENST00000443443 RAC2P15153 192 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 CLCQ05315 142 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 EGR3Q06889 387 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 MLANAQ16655 118 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 RALGPS1Q5JS13 557 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 MPZL3Q6UWV2 235 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 TSPYL5Q86VY4 417 aaPredicted RBP7.79□□□□□ -1.16
VPS50-206ENST00000443443 KIAA0825Q8IV33 1275 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 ASPNQ9BXN1 380 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 ADAMTS10Q9H324 1103 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 FAM53CQ9NYF3 392 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 PODXL2Q9NZ53 605 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 GMIPQ9P107 970 aa7.79□□□□□ -1.16
VPS50-206ENST00000443443 ATE1O95260 518 aa7.78□□□□□ -1.16
VPS50-206ENST00000443443 ZNF165P49910 485 aa7.78□□□□□ -1.16
VPS50-206ENST00000443443 LIN37Q96GY3 246 aaPredicted RBP7.78□□□□□ -1.16
VPS50-206ENST00000443443 C19orf73Q9NVV2 129 aa7.78□□□□□ -1.16
VPS50-206ENST00000443443 ZNF503-AS2A6NEH8 195 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 C8AP07357 584 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 GLI1P08151 1106 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 SRFP11831 508 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 GAB4Q2WGN9 574 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 LDLRAD1Q5T700 205 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 OVOS1Q6IE37 1185 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 USP48Q86UV5 1035 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 KSR1Q8IVT5 923 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 ABHD4Q8TB40 342 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS50-206ENST00000443443 EHMT1Q9H9B1 1298 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 TMEM59LQ9UK28 342 aa7.77□□□□□ -1.17
VPS50-206ENST00000443443 POLR2BP30876 1174 aaKnown RBP7.76□□□□□ -1.17
VPS50-206ENST00000443443 RNF4P78317 190 aa7.76□□□□□ -1.17
VPS50-206ENST00000443443 REXO1Q8N1G1 1221 aaKnown RBP7.76□□□□□ -1.17
VPS50-206ENST00000443443 MYLIPQ8WY64 445 aa7.76□□□□□ -1.17
VPS50-206ENST00000443443 ATG4CQ96DT6 458 aa7.76□□□□□ -1.17
VPS50-206ENST00000443443 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
VPS50-206ENST00000443443 SLC38A3Q99624 504 aa7.76□□□□□ -1.17
VPS50-206ENST00000443443 ANTXR1Q9H6X2 564 aa7.76□□□□□ -1.17
VPS50-206ENST00000443443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS50-206ENST00000443443 PCDHA11Q9Y5I1 949 aa7.76□□□□□ -1.17
VPS50-206ENST00000443443 ARID1BQ8NFD5 2236 aaPredicted RBP7.75□□□□□ -1.17
VPS50-206ENST00000443443 RBM47A0AV96 593 aaKnown RBP7.75□□□□□ -1.17
VPS50-206ENST00000443443 SHISA3A0PJX4 238 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 UBOX5O94941 541 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 ERVFC1P60507 584 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 PKN1Q16512 942 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 LRRFIP1Q32MZ4 808 aaKnown RBP7.75□□□□□ -1.17
VPS50-206ENST00000443443 CDCP2Q5VXM1 449 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 NLRC3Q7RTR2 1065 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 RNF34Q969K3 372 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 PCDHGB7Q9Y5F8 929 aa7.75□□□□□ -1.17
VPS50-206ENST00000443443 NMIQ13287 307 aaPredicted RBP7.74□□□□□ -1.17
VPS50-206ENST00000443443 FZD5Q13467 585 aa7.74□□□□□ -1.17
VPS50-206ENST00000443443 ZNF124Q15973 351 aa7.74□□□□□ -1.17
VPS50-206ENST00000443443 ZNF394Q53GI3 561 aa7.74□□□□□ -1.17
VPS50-206ENST00000443443 SLITRK4Q8IW52 837 aa7.74□□□□□ -1.17
VPS50-206ENST00000443443 CNNM2Q9H8M5 875 aa7.74□□□□□ -1.17
VPS50-206ENST00000443443 SSU72P8A0A1W2PR75 194 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 CLEC3AO75596 197 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 TRHRP34981 398 aaPredicted RBP7.73□□□□□ -1.17
VPS50-206ENST00000443443 FANCCQ00597 558 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 RAD51AP2Q09MP3 1159 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 NBPF12Q5TAG4 269 aaPredicted RBP7.73□□□□□ -1.17
VPS50-206ENST00000443443 FBXW10Q5XX13 1052 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 PRR23BQ6ZRT6 265 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 DHX38Q92620 1227 aaKnown RBP7.73□□□□□ -1.17
VPS50-206ENST00000443443 VWCEQ96DN2 955 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 ZNF512BQ96KM6 892 aaPredicted RBP7.73□□□□□ -1.17
VPS50-206ENST00000443443 FAM84AQ96KN4 292 aa7.73□□□□□ -1.17
VPS50-206ENST00000443443 METTL5Q9NRN9 209 aaKnown RBP7.73□□□□□ -1.17
VPS50-206ENST00000443443 FAM86C2PA6NEL3 165 aa7.72□□□□□ -1.17
VPS50-206ENST00000443443 TRIM26Q12899 539 aaPredicted RBP7.72□□□□□ -1.17
VPS50-206ENST00000443443 OXR1Q8N573 874 aa7.72□□□□□ -1.17
VPS50-206ENST00000443443 DIRC2Q96SL1 478 aa7.72□□□□□ -1.17
VPS50-206ENST00000443443 C19orf44Q9H6X5 657 aa7.72□□□□□ -1.17
VPS50-206ENST00000443443 NME1P15531 152 aaKnown RBP7.71□□□□□ -1.18
VPS50-206ENST00000443443 RPL10P27635 214 aaKnown RBP7.71□□□□□ -1.18
VPS50-206ENST00000443443 JAG1P78504 1218 aa7.71□□□□□ -1.18
VPS50-206ENST00000443443 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
VPS50-206ENST00000443443 ENOX1Q8TC92 643 aaKnown RBP7.71□□□□□ -1.18
VPS50-206ENST00000443443 FERD3LQ96RJ6 166 aa7.71□□□□□ -1.18
VPS50-206ENST00000443443 FBXL21Q9UKT6 434 aa7.71□□□□□ -1.18
VPS50-206ENST00000443443 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.7□□□□□ -1.18
VPS50-206ENST00000443443 HPXP02790 462 aa7.7□□□□□ -1.18
VPS50-206ENST00000443443 ZGLP1P0C6A0 271 aa7.7□□□□□ -1.18
VPS50-206ENST00000443443 CCNFP41002 786 aa7.7□□□□□ -1.18
VPS50-206ENST00000443443 SNW1Q13573 536 aaKnown RBP7.7□□□□□ -1.18
VPS50-206ENST00000443443 TMC3Q7Z5M5 1100 aa7.7□□□□□ -1.18
VPS50-206ENST00000443443 PDZD8Q8NEN9 1154 aa7.7□□□□□ -1.18
VPS50-206ENST00000443443 MKRN2Q9H000 416 aaKnown RBP7.7□□□□□ -1.18
VPS50-206ENST00000443443 NSUN3Q9H649 340 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms