RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 TTC41PQ6P2S7 1318 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 SNTNA6NMZ2 147 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 STAMBPO95630 424 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CPP00450 1065 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 PIP4K2AP48426 406 aaPredicted RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 KRT76Q01546 638 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 ITIH3Q06033 890 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CWF19L2Q2TBE0 894 aaKnown RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 SHQ1Q6PI26 577 aaKnown RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 RUFY4Q6ZNE9 571 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 SAMD14Q8IZD0 417 aaPredicted RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC197Q8NCU1 140 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 LRRC59Q96AG4 307 aaKnown RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 GSDMAQ96QA5 445 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 EPAS1Q99814 870 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 BRD8Q9H0E9 1235 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 BTBD7Q9P203 1132 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 PTPRCP08575 1304 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 SETD5Q9C0A6 1442 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 APOL1O14791 398 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 PRC1O43663 620 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 DR1Q01658 176 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC25Q86WR0 208 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 ZBTB8BQ8NAP8 495 aaPredicted RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 DYDC2Q96IM9 177 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CORO1CQ9ULV4 474 aaPredicted RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 PHF8Q9UPP1 1060 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 F8VZ95 297 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 FESP07332 822 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 IRX4P78413 519 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CASP8Q14790 479 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 COBLL1Q53SF7 1204 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 HEATR3Q7Z4Q2 680 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 LONP2Q86WA8 852 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 GID8Q9NWU2 228 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 STAG3Q9UJ98 1225 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CFAP73A6NFT4 308 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 B4DLN1 442 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 MBD4O95243 580 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 EIF4BP23588 611 aaKnown RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 EIF2B2P49770 351 aaKnown RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 PRKG1Q13976 671 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 SAFBQ15424 915 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CYB5D1Q6P9G0 228 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 STK32CQ86UX6 486 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 CENPOQ9BU64 300 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 BCL2L13Q9BXK5 485 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.17□□□□□ -1.42
PTPRC-209ENST00000442510 MOSPD1Q9UJG1 213 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 SYNRGQ9UMZ2 1314 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 TNIKQ9UKE5 1360 aa6.17□□□□□ -1.42
PTPRC-209ENST00000442510 GSTTP1A0A1W2PQM5 241 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 TESPA1A2RU30 521 aaPredicted RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 E9PMD0 336 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 AKR1B10O60218 316 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 LDHBP07195 334 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ADARP55265 1226 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 WASHC5Q12768 1159 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 LARP1BQ659C4 914 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 SND1Q7KZF4 910 aaKnown RBP eCLIP6.16□□□□□ -1.422e-7■■■□□ 16.8
PTPRC-209ENST00000442510 ST13P5Q8NFI4 369 aaPredicted RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 GAS2L2Q8NHY3 880 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 UQCC2Q9BRT2 126 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC28BQ9BUN5 200 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 C2CD2Q9Y426 696 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 PCDHGA4Q9Y5G9 962 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 CCNB3Q8WWL7 1395 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 RAB3GAP2Q9H2M9 1393 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 HIP1O00291 1037 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 EIF2S1P05198 315 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 CCNCP24863 283 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 PLA2G4AP47712 749 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ZBTB16Q05516 673 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 STX3Q13277 289 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC184Q52MB2 194 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ESCO1Q5FWF5 840 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ZNF569Q5MCW4 686 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 SFMBT2Q5VUG0 894 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 NCCRP1Q6ZVX7 275 aaPredicted RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ARHGEF9O43307 516 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 DNAJC6O75061 913 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 HSPA9P38646 679 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 DDR1Q08345 913 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 KARSQ15046 597 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 SLC5A9Q2M3M2 681 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 GALNT17Q6IS24 598 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ELMSAN1Q6PJG2 1045 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 PI16Q6UXB8 463 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 MGARPQ8TDB4 240 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 DNAJC25Q9H1X3 360 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 C8orf4Q9NR00 106 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 GTF3C4Q9UKN8 822 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ZNF644Q9H582 1327 aaPredicted RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 TEX28O15482 410 aa6.16□□□□□ -1.42
PTPRC-209ENST00000442510 ACTN4O43707 911 aaKnown RBP6.16□□□□□ -1.42
PTPRC-209ENST00000442510 SEC24BO95487 1268 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms