RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
SYNE2-206ENST00000441438 NLRP3Q96P20 1036 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 PLEKHG4BQ96PX9 1271 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 CNNM2Q9H8M5 875 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 PSD3Q9NYI0 1048 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 USP32Q8NFA0 1604 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 TOM1O60784 492 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 CSE1LP55060 971 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 ATXN2LQ8WWM7 1075 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 TMX2Q9Y320 296 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 CRYBG1Q9Y4K1 1723 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 KLRG2A4D1S0 409 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 ABL1P00519 1130 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 RIPK4P57078 832 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 DACT2Q5SW24 774 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 CEP72Q9P209 647 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 HERC5Q9UII4 1024 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
SYNE2-206ENST00000441438 PHRF1Q9P1Y6 1649 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.98□□□□□ -0.49
SYNE2-206ENST00000441438 RXRGP48443 463 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 CTAG1AP78358 180 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 ARHGEF6Q15052 776 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 NFKBIBQ15653 356 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 BEND5Q7L4P6 421 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 CCDC144CPQ8IYA2 1237 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 MAML1Q92585 1016 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 TMEM165Q9HC07 324 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 TCF7L2Q9NQB0 619 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-206ENST00000441438 CSPG5O95196 566 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 TIFAQ96CG3 184 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 CCDC68Q9H2F9 335 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 EIF3FO00303 357 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-206ENST00000441438 KLHL41O60662 606 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 POLR2FP61218 127 aaKnown RBP11.97□□□□□ -0.49
SYNE2-206ENST00000441438 GALNT5Q7Z7M9 940 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 DZIP1LQ8IYY4 767 aaKnown RBP11.97□□□□□ -0.49
SYNE2-206ENST00000441438 CNPY2Q9Y2B0 182 aa11.97□□□□□ -0.49
SYNE2-206ENST00000441438 NOSIPQ9Y314 301 aaKnown RBP11.97□□□□□ -0.49
SYNE2-206ENST00000441438 LRRFIP2Q9Y608 721 aaKnown RBP11.97□□□□□ -0.49
SYNE2-206ENST00000441438 SYNDIG1LA6NDD5 238 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 RASSF10A6NK89 507 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 TSPY2A6NKD2 308 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 AKR1B15C9JRZ8 316 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-206ENST00000441438 AKAP10O43572 662 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 CLASP2O75122 1294 aaKnown RBP11.96□□□□□ -0.49
SYNE2-206ENST00000441438 TSPY3P0CV98 308 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 TSPY8P0CW00 308 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 CYP11B2P19099 503 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 TSPY1Q01534 308 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 RRP12Q5JTH9 1297 aaKnown RBP11.96□□□□□ -0.49
SYNE2-206ENST00000441438 ISM2Q6H9L7 571 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 MZT2BQ6NZ67 158 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 CEP68Q76N32 757 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.49
SYNE2-206ENST00000441438 LRRC49Q8IUZ0 686 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 AKAP12Q02952 1782 aa11.96□□□□□ -0.49
SYNE2-206ENST00000441438 MARF1Q9Y4F3 1742 aaKnown RBP11.96□□□□□ -0.5
SYNE2-206ENST00000441438 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.5
SYNE2-206ENST00000441438 THAP11Q96EK4 314 aa11.96□□□□□ -0.5
SYNE2-206ENST00000441438 CSRNP2Q9H175 543 aa11.96□□□□□ -0.5
SYNE2-206ENST00000441438 ATP8A2Q9NTI2 1148 aa11.96□□□□□ -0.5
SYNE2-206ENST00000441438 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 UBAP1LF5GYI3 381 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 M0QX08 132 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 SKIV2L2P42285 1042 aaKnown RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 MATR3P43243 847 aaKnown RBP eCLIP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 HLTFQ14527 1009 aaKnown RBP eCLIP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 TAF7Q15545 349 aaPredicted RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 WDR44Q5JSH3 913 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 HHATQ5VTY9 493 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 PPP2R2DQ66LE6 453 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 FAM180BQ6P0A1 224 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 PEX5LQ8IYB4 626 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 ABTB2Q8N961 1025 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 DDX12PQ92771 950 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 ARHGEF2Q92974 986 aaKnown RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 HERPUD2Q9BSE4 406 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 ALG1Q9BT22 464 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 LIMD1Q9UGP4 676 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 DCTN4Q9UJW0 460 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 SMC2O95347 1197 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 MRPS35P82673 323 aaKnown RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 IDI1Q13907 227 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 EEPD1Q7L9B9 569 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 THOC1Q96FV9 657 aaKnown RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 TRIM8Q9BZR9 551 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms