RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 ATP2B2Q01814 1243 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 GRB14Q14449 540 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 SLFNL1Q499Z3 407 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 C12orf60Q5U649 245 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 C7orf61Q8IZ16 206 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 MB21D1Q8N884 522 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 LPAR1Q92633 364 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 TANGO6Q9C0B7 1094 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 ARHGEF10LQ9HCE6 1279 aa14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 DDX60LQ5H9U9 1706 aaKnown RBP14.01□□□□□ -0.17
UBE2D4-204ENST00000440899 USP17L12C9JPN9 530 aa14□□□□□ -0.17
UBE2D4-204ENST00000440899 USP17L21D6R901 530 aa14□□□□□ -0.17
UBE2D4-204ENST00000440899 STRNO43815 780 aa14□□□□□ -0.17
UBE2D4-204ENST00000440899 CDK8P49336 464 aa14□□□□□ -0.17
UBE2D4-204ENST00000440899 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
UBE2D4-204ENST00000440899 DNAH12Q6ZR08 3092 aa14□□□□□ -0.17
UBE2D4-204ENST00000440899 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 PFASO15067 1338 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 COL6A1P12109 1028 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 AKR1B1P15121 316 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 BMP8BP34820 402 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 ICA1Q05084 483 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 KIAA1755Q5JYT7 1200 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 C16orf86Q6ZW13 317 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 SIAH1Q8IUQ4 282 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 GDF15Q99988 308 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 MOV10L1Q9BXT6 1211 aaKnown RBP13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 SPATC1LQ9H0A9 340 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 VCPKMTQ9H867 229 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 ZMYND8Q9ULU4 1186 aaPredicted RBP13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 TMX2Q9Y320 296 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 SLC4A4Q9Y6R1 1079 aa13.99□□□□□ -0.17
UBE2D4-204ENST00000440899 CYP2D7A0A087X1C5 515 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 SMARCA5O60264 1052 aaPredicted RBP13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 MSCO60682 206 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 CHGBP05060 677 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 DSG3P32926 999 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 DPP9Q86TI2 863 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 NPLOC4Q8TAT6 608 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 PUS7LQ9H0K6 701 aaKnown RBP13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
UBE2D4-204ENST00000440899 FLOT1O75955 427 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 ERCC3P19447 782 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 ADORA2AP29274 412 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 CNGA1P29973 690 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 CYP2C19P33261 490 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 CLEC10AQ8IUN9 316 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 ABRAQ8N0Z2 381 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 MROH8Q9H579 483 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 KANSL2Q9H9L4 492 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 SLC5A4Q9NY91 659 aa13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 DDX20Q9UHI6 824 aaKnown RBP13.97□□□□□ -0.17
UBE2D4-204ENST00000440899 SMIM22K7EJ46 135 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 WDR46O15213 610 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 IGHA2P01877 340 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 SYN1P17600 705 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 PLS1Q14651 629 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 OLFML2BQ68BL8 750 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 ATG4CQ96DT6 458 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 STRBPQ96SI9 672 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 DCTPP1Q9H773 170 aa13.96□□□□□ -0.17
UBE2D4-204ENST00000440899 ALPK3Q96L96 1907 aa13.96□□□□□ -0.18
UBE2D4-204ENST00000440899 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 LRRC26Q2I0M4 334 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 SBK1Q52WX2 424 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 NCAPG2Q86XI2 1143 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 KBTBD3Q8NAB2 608 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 TRPV1Q8NER1 839 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 GOPCQ9HD26 462 aa13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 ARPP21Q9UBL0 812 aaPredicted RBP13.95□□□□□ -0.18
UBE2D4-204ENST00000440899 SOX1O00570 391 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 COBLO75128 1261 aa13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 SLC25A27O95847 323 aa13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 FCER1AP12319 257 aa13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 CYBAP13498 195 aa13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 SENP6Q9GZR1 1112 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 ADAMTS5Q9UNA0 930 aa13.94□□□□□ -0.18
UBE2D4-204ENST00000440899 GSG1L2A8MUP6 293 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 DNM1LO00429 736 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 RNF113AO15541 343 aaKnown RBP13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 TMEM132BQ14DG7 1078 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 ARRDC4Q8NCT1 418 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 APPBP2Q92624 585 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 LRCH3Q96II8 777 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 MKNK2Q9HBH9 465 aa13.93□□□□□ -0.18
UBE2D4-204ENST00000440899 BAZ2AQ9UIF9 1905 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms