RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ATP2B2Q01814 1243 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 GABPAQ06546 454 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 MSL3Q8N5Y2 521 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 SLC17A8Q8NDX2 589 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 UBE2OQ9C0C9 1292 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 TXNRD2Q9NNW7 524 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 PIH1D3Q9NQM4 214 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 RLFQ13129 1914 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 LTBP2Q14767 1821 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 PFASO15067 1338 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 COG2Q14746 738 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 TMEM179Q6ZVK1 233 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 CCDC84Q86UT8 332 aaPredicted RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 DIS3LQ8TF46 1054 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 LBHD1Q9BQE6 289 aaPredicted RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 ATP8A2Q9NTI2 1148 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 SYNPO2Q9UMS6 1093 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 MYH7P12883 1935 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 PARP14Q460N5 1801 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 MAGEB6P1A0A0J9YX57 407 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 VCAM1P19320 739 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 SNX17Q15036 470 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 ADGRA1Q86SQ6 560 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 RPAP2Q8IXW5 612 aaPredicted RBP7.22□□□□□ -1.25
PTPRR-204ENST00000440835 EXOC6Q8TAG9 804 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 ARHGEF10LQ9HCE6 1279 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 PRKAG2Q9UGJ0 569 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 TRIOBPQ9H2D6 2365 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 IDH1O75874 414 aaKnown RBP7.22□□□□□ -1.25
PTPRR-204ENST00000440835 GDF11O95390 407 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 SHMT1P34896 483 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 ZSCAN25Q6NSZ9 544 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 MAGEB6Q8N7X4 407 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 RIOK1Q9BRS2 568 aaKnown RBP7.22□□□□□ -1.25
PTPRR-204ENST00000440835 TANGO6Q9C0B7 1094 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTPRR-204ENST00000440835 PORCNQ9H237 461 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 SNRKQ9NRH2 765 aa7.22□□□□□ -1.25
PTPRR-204ENST00000440835 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.22□□□□□ -1.25
PTPRR-204ENST00000440835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.22□□□□□ -1.25
PTPRR-204ENST00000440835 SPDYE16A6NNV3 312 aaPredicted RBP7.21□□□□□ -1.25
PTPRR-204ENST00000440835 WDR46O15213 610 aaKnown RBP7.21□□□□□ -1.25
PTPRR-204ENST00000440835 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.25
PTPRR-204ENST00000440835 POLR3DP05423 398 aaPredicted RBP7.21□□□□□ -1.25
PTPRR-204ENST00000440835 CYBAP13498 195 aa7.21□□□□□ -1.25
PTPRR-204ENST00000440835 Q3C1V9 767 aa7.21□□□□□ -1.25
PTPRR-204ENST00000440835 EAF2Q96CJ1 260 aaPredicted RBP7.21□□□□□ -1.25
PTPRR-204ENST00000440835 KIF1BPQ96EK5 621 aa7.21□□□□□ -1.25
PTPRR-204ENST00000440835 PAGR1Q9BTK6 254 aa7.21□□□□□ -1.25
PTPRR-204ENST00000440835 KBTBD13C9JR72 458 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 SOX1O00570 391 aaPredicted RBP7.21□□□□□ -1.26
PTPRR-204ENST00000440835 SEPT4O43236 478 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 BCAR3O75815 825 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 JAG1P78504 1218 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 TRIM32Q13049 653 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 CEP85Q6P2H3 762 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 CLASRPQ8N2M8 674 aaKnown RBP7.21□□□□□ -1.26
PTPRR-204ENST00000440835 DEFB123Q8N688 67 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 SEZ6LQ9BYH1 1024 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 RPAP3Q9H6T3 665 aaPredicted RBP7.21□□□□□ -1.26
PTPRR-204ENST00000440835 MTMR10Q9NXD2 777 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 SAP30BPQ9UHR5 308 aaKnown RBP7.21□□□□□ -1.26
PTPRR-204ENST00000440835 CEP290O15078 2479 aa7.21□□□□□ -1.26
PTPRR-204ENST00000440835 DLL1O00548 723 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 CCND3P30281 292 aaPredicted RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 DSG3P32926 999 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 CLCN1P35523 988 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 DYNLL1P63167 89 aaKnown RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 LRRC26Q2I0M4 334 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 ITPRIPQ8IWB1 547 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 TSEN34Q9BSV6 310 aaKnown RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 ZMYND8Q9ULU4 1186 aaPredicted RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 TMX2Q9Y320 296 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 SLURP2P0DP57 97 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 PDE6AP16499 860 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 SMAD3P84022 425 aaKnown RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 RAB3GAP1Q15042 981 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 GIMAP6Q6P9H5 292 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 DPP9Q86TI2 863 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 AACSQ86V21 672 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 SPATC1LQ9H0A9 340 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 ADAMTS5Q9UNA0 930 aa7.2□□□□□ -1.26
PTPRR-204ENST00000440835 GREB1LQ9C091 1923 aaPredicted RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 ZNFX1Q9P2E3 1918 aaKnown RBP7.2□□□□□ -1.26
PTPRR-204ENST00000440835 POTEB2H3BUK9 544 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 FDX1P10109 184 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 UBE3CQ15386 1083 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 PPP4R3BQ5MIZ7 849 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 CCDC174Q6PII3 467 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 TEX2Q8IWB9 1127 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 RHPN1Q8TCX5 695 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 GOPCQ9HD26 462 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 BTBD7Q9P203 1132 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 DDX19BQ9UMR2 479 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 PHF24Q9UPV7 400 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 PLXNA1Q9UIW2 1896 aa7.19□□□□□ -1.26
PTPRR-204ENST00000440835 TCRBV5S4A2TA0A5A2 114 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms