RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 Q6ZS46 218 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 CCNJLQ8IV13 435 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 AGGF1Q8N302 714 aaeCLIP8.11□□□□□ -1.114e-12■□□□□ 8.6
CHD6-204ENST00000440647 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 LIN7BQ9HAP6 207 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 RNF112Q9ULX5 631 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 COL24A1Q17RW2 1714 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 NSD3Q9BZ95 1437 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 NSD2O96028 1365 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 INSRP06213 1382 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 PNPLA7Q6ZV29 1317 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 PKD1L3Q7Z443 1732 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 METTL12A8MUP2 240 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 ADAM11O75078 769 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 WISP1O95388 367 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
CHD6-204ENST00000440647 NBPF6Q5VWK0 638 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 ACAD11Q709F0 780 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 TMC7Q7Z402 723 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
CHD6-204ENST00000440647 NBPF4Q96M43 638 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 CSRNP1Q96S65 589 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 TCF12Q99081 682 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 ITGB4P16144 1822 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 TAF1LQ8IZX4 1826 aa8.1□□□□□ -1.11
CHD6-204ENST00000440647 ANKRD26Q9UPS8 1709 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 MAP2P11137 1827 aaKnown RBP8.09□□□□□ -1.11
CHD6-204ENST00000440647 A0A096LPE4 126 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 A0A1W2PPZ6 126 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 PPM1GO15355 546 aaPredicted RBP8.09□□□□□ -1.11
CHD6-204ENST00000440647 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
CHD6-204ENST00000440647 HSP90AB2PQ58FF8 381 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 HGSNATQ68CP4 663 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 CCDC74AQ96AQ1 378 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
CHD6-204ENST00000440647 NPHS2Q9NP85 383 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 TOGARAM1Q9Y4F4 1720 aa8.09□□□□□ -1.11
CHD6-204ENST00000440647 PATL2C9JE40 543 aaKnown RBP8.08□□□□□ -1.12
CHD6-204ENST00000440647 GLB1P16278 677 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 MAPK1P28482 360 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 GRIA4P48058 902 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 POLR3GLQ9BT43 218 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 EHD4Q9H223 541 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 PALLDQ8WX93 1383 aa8.08□□□□□ -1.12
CHD6-204ENST00000440647 C4BP0C0L5 1744 aa8.07□□□□□ -1.12
CHD6-204ENST00000440647 NLRP12P59046 1061 aa8.07□□□□□ -1.12
CHD6-204ENST00000440647 PLCB3Q01970 1234 aa8.07□□□□□ -1.12
CHD6-204ENST00000440647 SPRED3Q2MJR0 410 aa8.07□□□□□ -1.12
CHD6-204ENST00000440647 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
CHD6-204ENST00000440647 UBL7Q96S82 380 aaPredicted RBP8.07□□□□□ -1.12
CHD6-204ENST00000440647 CEP41Q9BYV8 373 aa8.07□□□□□ -1.12
CHD6-204ENST00000440647 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
CHD6-204ENST00000440647 DSC3Q14574 896 aa8.06□□□□□ -1.12
CHD6-204ENST00000440647 COL23A1Q86Y22 540 aaPredicted RBP8.06□□□□□ -1.12
CHD6-204ENST00000440647 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
CHD6-204ENST00000440647 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
CHD6-204ENST00000440647 CLEC4MQ9H2X3 399 aaPredicted RBP8.06□□□□□ -1.12
CHD6-204ENST00000440647 SPG7Q9UQ90 795 aa8.06□□□□□ -1.12
CHD6-204ENST00000440647 UBR3Q6ZT12 1888 aa8.05□□□□□ -1.12
CHD6-204ENST00000440647 GSC2O15499 205 aa8.05□□□□□ -1.12
CHD6-204ENST00000440647 TREHO43280 583 aa8.05□□□□□ -1.12
CHD6-204ENST00000440647 PCDH1Q08174 1060 aa8.05□□□□□ -1.12
CHD6-204ENST00000440647 NLGN2Q8NFZ4 835 aa8.05□□□□□ -1.12
CHD6-204ENST00000440647 NCAPD2Q15021 1401 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 MEGF11A6BM72 1044 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 CYP27B1O15528 508 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 GADD45BO75293 160 aaPredicted RBP8.04□□□□□ -1.12
CHD6-204ENST00000440647 ITPKAP23677 461 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 EPS8L3Q8TE67 593 aaKnown RBP8.04□□□□□ -1.12
CHD6-204ENST00000440647 RUSC1Q9BVN2 902 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 CHMP4AQ9BY43 222 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 RNF208Q9H0X6 261 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 TMOD3Q9NYL9 352 aa8.04□□□□□ -1.12
CHD6-204ENST00000440647 WASHC2AQ641Q2 1341 aa8.03□□□□□ -1.12
CHD6-204ENST00000440647 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
CHD6-204ENST00000440647 FSTP19883 344 aa8.03□□□□□ -1.12
CHD6-204ENST00000440647 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
CHD6-204ENST00000440647 GSTM4Q03013 218 aa8.03□□□□□ -1.12
CHD6-204ENST00000440647 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
CHD6-204ENST00000440647 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
CHD6-204ENST00000440647 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
CHD6-204ENST00000440647 IFNL2Q8IZJ0 200 aa8.03□□□□□ -1.12
CHD6-204ENST00000440647 C1QTNF8P60827 252 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 UVSSAQ2YD98 709 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 ANKRD34AQ69YU3 496 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 ARMC10Q8N2F6 343 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 PIGBQ92521 554 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 FAM46AQ96IP4 442 aaKnown RBP8.02□□□□□ -1.13
CHD6-204ENST00000440647 ASB16Q96NS5 453 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 ZNF576Q9H609 170 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 ABCB6Q9NP58 842 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 PCMTD2Q9NV79 361 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 STOML1Q9UBI4 398 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms