RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 SDSP20132 328 aa16.37■□□□□ 0.21
LTBR-202ENST00000440421 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
LTBR-202ENST00000440421 ERVK-24P63145 666 aa16.37■□□□□ 0.21
LTBR-202ENST00000440421 Q3C1V9 767 aa16.37■□□□□ 0.21
LTBR-202ENST00000440421 GTF3C2Q8WUA4 911 aaPredicted RBP16.37■□□□□ 0.21
LTBR-202ENST00000440421 VCPKMTQ9H867 229 aa16.37■□□□□ 0.21
LTBR-202ENST00000440421 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
LTBR-202ENST00000440421 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
LTBR-202ENST00000440421 SLC3A2P08195 630 aaKnown RBP16.36■□□□□ 0.21
LTBR-202ENST00000440421 ELNP15502 786 aa16.36■□□□□ 0.21
LTBR-202ENST00000440421 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
LTBR-202ENST00000440421 PDE4BQ07343 736 aa16.36■□□□□ 0.21
LTBR-202ENST00000440421 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
LTBR-202ENST00000440421 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
LTBR-202ENST00000440421 LPAR1Q92633 364 aa16.36■□□□□ 0.21
LTBR-202ENST00000440421 TMEM106CQ9BVX2 250 aa16.36■□□□□ 0.21
LTBR-202ENST00000440421 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
LTBR-202ENST00000440421 SPDYE16A6NNV3 312 aaPredicted RBP16.35■□□□□ 0.21
LTBR-202ENST00000440421 ADCY3O60266 1144 aa16.35■□□□□ 0.21
LTBR-202ENST00000440421 CNMDO75829 334 aa16.35■□□□□ 0.21
LTBR-202ENST00000440421 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
LTBR-202ENST00000440421 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
LTBR-202ENST00000440421 PORCNQ9H237 461 aa16.35■□□□□ 0.21
LTBR-202ENST00000440421 RABGAP1Q9Y3P9 1069 aa16.35■□□□□ 0.21
LTBR-202ENST00000440421 TSPY3P0CV98 308 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 TSPY8P0CW00 308 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 COG2Q14746 738 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 MTFR1Q15390 333 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 FAM47AQ5JRC9 791 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 CWC27Q6UX04 472 aaKnown RBP16.34■□□□□ 0.21
LTBR-202ENST00000440421 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
LTBR-202ENST00000440421 GOPCQ9HD26 462 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 DIAPH3Q9NSV4 1193 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 BTBD7Q9P203 1132 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 CCDC171Q6TFL3 1326 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 DOCK3Q8IZD9 2030 aa16.34■□□□□ 0.21
LTBR-202ENST00000440421 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
LTBR-202ENST00000440421 FLOT1O75955 427 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 FGAP02671 866 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
LTBR-202ENST00000440421 EN2P19622 333 aaPredicted RBP16.33■□□□□ 0.2
LTBR-202ENST00000440421 MAPK4P31152 587 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 TFAP4Q01664 338 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 IRF5Q13568 498 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 LBX2Q6XYB7 198 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 CEP95Q96GE4 821 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 HOXC10Q9NYD6 342 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 GJD2Q9UKL4 321 aa16.33■□□□□ 0.2
LTBR-202ENST00000440421 IGKV6D-41A0A0C4DH26 115 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 GSPT1P15170 499 aaKnown RBP16.32■□□□□ 0.2
LTBR-202ENST00000440421 UBXN2AP68543 259 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 CCNA1P78396 465 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 ALX1Q15699 326 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 FAM83BQ5T0W9 1011 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 GPR142Q7Z601 462 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 RBBP6Q7Z6E9 1792 aaKnown RBP16.32■□□□□ 0.2
LTBR-202ENST00000440421 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
LTBR-202ENST00000440421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
LTBR-202ENST00000440421 TACC3Q9Y6A5 838 aa16.32■□□□□ 0.2
LTBR-202ENST00000440421 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 HIP1O00291 1037 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 INHAP05111 366 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 CCL5P13501 91 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 CYP2B6P20813 491 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 DSG3P32926 999 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 MFAP1P55081 439 aaKnown RBP16.31■□□□□ 0.2
LTBR-202ENST00000440421 HAND2P61296 217 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 PLEKHH3Q7Z736 793 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
LTBR-202ENST00000440421 ATG4CQ96DT6 458 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 NUDT12Q9BQG2 462 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 FBXO28Q9NVF7 368 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 MTMR4Q9NYA4 1195 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 RLFQ13129 1914 aa16.31■□□□□ 0.2
LTBR-202ENST00000440421 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 F5H6K3 240 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
LTBR-202ENST00000440421 KLRC3Q07444 240 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 PLS1Q14651 629 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 RNF208Q9H0X6 261 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 UNC93B1Q9H1C4 597 aa16.3■□□□□ 0.2
LTBR-202ENST00000440421 PLIN4Q96Q06 1357 aa16.29■□□□□ 0.2
LTBR-202ENST00000440421 A0A0G2JMZ2 1700 aa16.29■□□□□ 0.2
LTBR-202ENST00000440421 TTLL1O95922 423 aa16.29■□□□□ 0.2
LTBR-202ENST00000440421 NDUFB10O96000 172 aa16.29■□□□□ 0.2
LTBR-202ENST00000440421 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
LTBR-202ENST00000440421 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
LTBR-202ENST00000440421 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms