RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 VCPKMTQ9H867 229 aa28.13■■■□□ 2.09
VARS-217ENST00000440048 RBPJLQ9UBG7 517 aa28.13■■■□□ 2.09
VARS-217ENST00000440048 TNRC18O15417 2968 aaPredicted RBP28.13■■■□□ 2.09
VARS-217ENST00000440048 MYPNQ86TC9 1320 aa28.13■■■□□ 2.09
VARS-217ENST00000440048 TNPO2O14787 897 aaKnown RBP28.12■■■□□ 2.09
VARS-217ENST00000440048 FGAP02671 866 aa28.12■■■□□ 2.09
VARS-217ENST00000440048 MFAP1P55081 439 aaKnown RBP28.12■■■□□ 2.09
VARS-217ENST00000440048 LPAR1Q92633 364 aa28.12■■■□□ 2.09
VARS-217ENST00000440048 ARMC5Q96C12 935 aa28.12■■■□□ 2.09
VARS-217ENST00000440048 ANAPC4Q9UJX5 808 aa28.12■■■□□ 2.09
VARS-217ENST00000440048 IGKV6D-41A0A0C4DH26 115 aa28.11■■■□□ 2.09
VARS-217ENST00000440048 PRKCZQ05513 592 aa28.11■■■□□ 2.09
VARS-217ENST00000440048 GPRC5AQ8NFJ5 357 aa28.11■■■□□ 2.09
VARS-217ENST00000440048 GABRQQ9UN88 632 aa28.11■■■□□ 2.09
VARS-217ENST00000440048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.11■■■□□ 2.09
VARS-217ENST00000440048 MYH4Q9Y623 1939 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 SLC9C1Q4G0N8 1177 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 NBPF11Q86T75 865 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 SPICE1Q8N0Z3 855 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 PAGR1Q9BTK6 254 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 INCENPQ9NQS7 918 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 NYAP2Q9P242 653 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 RLFQ13129 1914 aa28.1■■■□□ 2.09
VARS-217ENST00000440048 ERVK-9P63128 1117 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 ERVK-24P63145 666 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 FAM47AQ5JRC9 791 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 NEDD1Q8NHV4 660 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 RAET1EQ8TD07 263 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 TANGO6Q9C0B7 1094 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 TACC3Q9Y6A5 838 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 ZMYM6O95789 1325 aa28.09■■■□□ 2.09
VARS-217ENST00000440048 SPDYE16A6NNV3 312 aaPredicted RBP28.08■■■□□ 2.09
VARS-217ENST00000440048 TSPY3P0CV98 308 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 TSPY8P0CW00 308 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 TFAP4Q01664 338 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 Q3C1V9 767 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 LBX2Q6XYB7 198 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 CENPQQ7L2Z9 268 aaPredicted RBP28.08■■■□□ 2.09
VARS-217ENST00000440048 COA7Q96BR5 231 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 GOPCQ9HD26 462 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 RABGAP1Q9Y3P9 1069 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 PLIN4Q96Q06 1357 aa28.08■■■□□ 2.09
VARS-217ENST00000440048 WDR46O15213 610 aaKnown RBP28.07■■■□□ 2.08
VARS-217ENST00000440048 CNMDO75829 334 aa28.07■■■□□ 2.08
VARS-217ENST00000440048 COG2Q14746 738 aa28.07■■■□□ 2.08
VARS-217ENST00000440048 SH3TC2Q8TF17 1288 aa28.07■■■□□ 2.08
VARS-217ENST00000440048 CEP95Q96GE4 821 aa28.07■■■□□ 2.08
VARS-217ENST00000440048 MTMR4Q9NYA4 1195 aa28.07■■■□□ 2.08
VARS-217ENST00000440048 CLIP2Q9UDT6 1046 aa28.07■■■□□ 2.08
VARS-217ENST00000440048 FLT3LGP49771 235 aa28.06■■■□□ 2.08
VARS-217ENST00000440048 ZNF333Q96JL9 665 aa28.06■■■□□ 2.08
VARS-217ENST00000440048 HOXC10Q9NYD6 342 aa28.06■■■□□ 2.08
VARS-217ENST00000440048 PARP14Q460N5 1801 aa28.06■■■□□ 2.08
VARS-217ENST00000440048 RBBP6Q7Z6E9 1792 aaKnown RBP28.05■■■□□ 2.08
VARS-217ENST00000440048 ORC4O43929 436 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 RAD21O60216 631 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 FGRP09769 529 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 GRK4P32298 578 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 HAND2P61296 217 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 MKL1Q969V6 931 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 PORCNQ9H237 461 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 BTBD7Q9P203 1132 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 PLXNB2O15031 1838 aa28.04■■■□□ 2.08
VARS-217ENST00000440048 FLOT1O75955 427 aa28.03■■■□□ 2.08
VARS-217ENST00000440048 TTLL1O95922 423 aa28.03■■■□□ 2.08
VARS-217ENST00000440048 DSG3P32926 999 aa28.03■■■□□ 2.08
VARS-217ENST00000440048 IL25Q9H293 177 aa28.03■■■□□ 2.08
VARS-217ENST00000440048 A0A0G2JMZ2 1700 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 TSPY2A6NKD2 308 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 F5H6K3 240 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 RANBP6O60518 1105 aaKnown RBP28.02■■■□□ 2.08
VARS-217ENST00000440048 MAPK4P31152 587 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 KLRC3Q07444 240 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 IRF5Q13568 498 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 NBPF3Q9H094 633 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 GJD2Q9UKL4 321 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 LAMA4Q16363 1823 aa28.02■■■□□ 2.08
VARS-217ENST00000440048 ADCY3O60266 1144 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 NDUFB10O96000 172 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 CHMLP26374 656 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 CCNA1P78396 465 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 FAM83BQ5T0W9 1011 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 CCAR1Q8IX12 1150 aaKnown RBP28.01■■■□□ 2.07
VARS-217ENST00000440048 SLAIN1Q8ND83 568 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 DSCC1Q9BVC3 393 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 TMEM106CQ9BVX2 250 aa28.01■■■□□ 2.07
VARS-217ENST00000440048 RRP12Q5JTH9 1297 aaKnown RBP28■■■□□ 2.07
VARS-217ENST00000440048 SAMD1Q6SPF0 538 aaPredicted RBP28■■■□□ 2.07
VARS-217ENST00000440048 SKAP1Q86WV1 359 aa28■■■□□ 2.07
VARS-217ENST00000440048 LRRC47Q8N1G4 583 aaKnown RBP28■■■□□ 2.07
VARS-217ENST00000440048 ATG4CQ96DT6 458 aa28■■■□□ 2.07
VARS-217ENST00000440048 NUP88Q99567 741 aaPredicted RBP28■■■□□ 2.07
VARS-217ENST00000440048 IL17RBQ9NRM6 502 aa28■■■□□ 2.07
VARS-217ENST00000440048 TOMM22Q9NS69 142 aa28■■■□□ 2.07
VARS-217ENST00000440048 FBXO28Q9NVF7 368 aa28■■■□□ 2.07
VARS-217ENST00000440048 SYNPO2Q9UMS6 1093 aa28■■■□□ 2.07
VARS-217ENST00000440048 MYCP01106 439 aaPredicted RBP27.99■■■□□ 2.07
VARS-217ENST00000440048 AKNAD1Q5T1N1 836 aa27.99■■■□□ 2.07
VARS-217ENST00000440048 TBC1D10CQ8IV04 446 aa27.99■■■□□ 2.07
VARS-217ENST00000440048 BRCA2P51587 3418 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms