RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DOCK2Q92608 1830 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 TCRBV5S4A2TA0A5A2 114 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 GPR25O00155 361 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 SLC27A2O14975 620 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 ENTPD3O75355 529 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 RPS6KB1P23443 525 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 CAP2P40123 477 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 SNAP25P60880 206 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 BLOC1S2Q6QNY1 142 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 CHST3Q7LGC8 479 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 AMOTL1Q8IY63 956 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 SCYL3Q8IZE3 742 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 SH3TC2Q8TF17 1288 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 ZNF512BQ96KM6 892 aaPredicted RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 PANK2Q9BZ23 570 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 TANGO6Q9C0B7 1094 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 MCOLN1Q9GZU1 580 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 IL25Q9H293 177 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 CABP5Q9NP86 173 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 RRAGDQ9NQL2 400 aaPredicted RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 FOXD4L1Q9NU39 408 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 PPP2R3BQ9Y5P8 575 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 RBM8AQ9Y5S9 174 aaKnown RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 TCHHQ07283 1943 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 BAZ2AQ9UIF9 1905 aaKnown RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 RBAK-RBAKDNI3L0D1 243 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 ZFYP08048 801 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 TAL1P17542 331 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 CASTP20810 708 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 GTF2A2P52657 109 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 OTUD7BQ6GQQ9 843 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 CTR9Q6PD62 1173 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 LRRC47Q8N1G4 583 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 PIBF1Q8WXW3 757 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 FAM163AQ96GL9 167 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 AGXT2Q9BYV1 514 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 SCAND2PQ9GZW5 306 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 TMEM63CQ9P1W3 806 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 MANSC4A6NHS7 340 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 SPDYE5A6NIY4 337 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 GSG1L2A8MUP6 293 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 DTNBO60941 627 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 PPFIA3O75145 1194 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 CETPP11597 493 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 SYT1P21579 422 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 IRX3P78415 501 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 PKP1Q13835 747 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 TMED8Q6PL24 325 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 TTC6Q86TZ1 520 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 RASEFQ8IZ41 740 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 ZNF280CQ8ND82 737 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 APPBP2Q92624 585 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 JAKMIP1Q96N16 626 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 STRBPQ96SI9 672 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 ZSCAN16Q9H4T2 348 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 EPB41L4AQ9HCS5 686 aaPredicted RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 USP25Q9UHP3 1055 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 ZBTB21Q9ULJ3 1066 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 DOCK3Q8IZD9 2030 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 PSME4Q14997 1843 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 USP17L5A8MUK1 530 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 CTNND1O60716 968 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 CDK8P49336 464 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 KRT85P78386 507 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 HMGN5P82970 282 aaKnown RBP5.53□□□□□ -1.52
EDEM3-203ENST00000439962 MCMDC2Q4G0Z9 681 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 ZSCAN25Q6NSZ9 544 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 RAB11FIP4Q86YS3 637 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 IFNL3Q8IZI9 196 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 CPXCR1Q8N123 301 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 MRIQ9BWK5 157 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 HOMER2Q9NSB8 354 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 FBXO28Q9NVF7 368 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 MTMR6Q9Y217 621 aa5.53□□□□□ -1.52
EDEM3-203ENST00000439962 A0A1W2PRG0 241 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 USP17L10C9JJH3 530 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ASNSP08243 561 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ELNP15502 786 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 SHMT1P34896 483 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 PSMC4P43686 418 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 EVCP57679 992 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 PPP4CP60510 307 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 SP3Q02447 781 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 PTH1RQ03431 593 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ICA1Q05084 483 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 PPATQ06203 517 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ANO1Q5XXA6 986 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ZNF444Q8N0Y2 327 aaPredicted RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 HOOK2Q96ED9 719 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 UPF3BQ9BZI7 483 aaKnown RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 RBSNQ9H1K0 784 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 DHX36Q9H2U1 1008 aaKnown RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 CPVLQ9H3G5 476 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 EFCC1Q9HA90 598 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ZFYVE28Q9HCC9 887 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 TMOD4Q9NZQ9 345 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 CLIP2Q9UDT6 1046 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms