RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PNPLA7Q6ZV29 1317 aa17.32■□□□□ 0.36
CDC42EP4-202ENST00000439510 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 GNAT2P19087 354 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 DPYDQ12882 1025 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 TTF2Q9UNY4 1162 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 GYPCP04921 128 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 GPTP24298 496 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 ZKSCAN3Q9BRR0 538 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
CDC42EP4-202ENST00000439510 ERICH2A1L162 156 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 FILIP1LQ4L180 1135 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 CMTR1Q8N1G2 835 aaKnown RBP17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 CCDC82Q8N4S0 544 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 SHISA4Q96DD7 197 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 EPSTI1Q96J88 318 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 ZSWIM4Q9H7M6 989 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 CTAGE9A4FU28 777 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 CASP14P31944 242 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 PPP2R5BQ15173 497 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 ZSCAN26Q16670 478 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 RRP12Q5JTH9 1297 aaKnown RBP17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 ZNF569Q5MCW4 686 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 HDXQ7Z353 690 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 PNKPQ96T60 521 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 MYH13Q9UKX3 1938 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 PDE8AO60658 829 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 STARD3NLO95772 234 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 KLHL10Q6JEL2 608 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 CPLX3Q8WVH0 158 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 SLC4A9Q96Q91 983 aa17.3■□□□□ 0.36
CDC42EP4-202ENST00000439510 PRKAB2O43741 272 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 AFMP43652 599 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 TDO2P48775 406 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 STX17P56962 302 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 L1RE1Q9UN81 338 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 ERLIN1O75477 346 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 BMP15O95972 392 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 FXR1P51114 621 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 KCNQ4P56696 695 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 TMTC1Q8IUR5 882 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 SEPT12Q8IYM1 358 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 LCORLQ8N3X6 602 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 GOLGA5Q8TBA6 731 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 MYO1AQ9UBC5 1043 aa17.29■□□□□ 0.36
CDC42EP4-202ENST00000439510 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 LRRC10BA6NIK2 292 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 KIF4BQ2VIQ3 1234 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 IQUBQ8NA54 791 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 SLC5A1P13866 664 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 GYS2P54840 703 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 SEC23AQ15436 765 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 WHAMMP3Q1A5X7 153 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 SLC35F6Q8N357 371 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 PLCD3Q8N3E9 789 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
CDC42EP4-202ENST00000439510 XBP1P17861 261 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 CASP1P29466 404 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 PKN1Q16512 942 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 PDE11AQ9HCR9 933 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 TRMT112Q9UI30 125 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 KRT2P35908 639 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 EARS2Q5JPH6 523 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 NAPGQ99747 312 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 FEZ2Q9UHY8 353 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.36
CDC42EP4-202ENST00000439510 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.35
CDC42EP4-202ENST00000439510 TUBBP07437 444 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 ERVK-24P63145 666 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 FUT2Q10981 343 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 SMYD4Q8IYR2 804 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 ABHD10Q9NUJ1 306 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 ARHGAP25P42331 645 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 KRT31Q15323 416 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 ACRBPQ8NEB7 543 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 ABCB6Q9NP58 842 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 LMAN1P49257 510 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 MCM6Q14566 821 aa17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
CDC42EP4-202ENST00000439510 VPS54Q9P1Q0 977 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms