RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 HSPD1P10809 573 aaKnown RBP12.43□□□□□ -0.42
MCF2L-216ENST00000439475 CTGFP29279 349 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 MAPK4P31152 587 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 GRK4P32298 578 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 SOX10P56693 466 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 ERVK-24P63145 666 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-216ENST00000439475 CWC27Q6UX04 472 aaKnown RBP12.43□□□□□ -0.42
MCF2L-216ENST00000439475 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 RBPJLQ9UBG7 517 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-216ENST00000439475 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 PRDM1O75626 825 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 FGAP02671 866 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 NEFLP07196 543 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 FLT3LGP49771 235 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 TFAP4Q01664 338 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 PRKCZQ05513 592 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 IRF5Q13568 498 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 LBX2Q6XYB7 198 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 SIAH1Q8IUQ4 282 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 MB21D1Q8N884 522 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 PXYLP1Q8TE99 480 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 RUFY2Q8WXA3 655 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 SYNPO2Q9UMS6 1093 aa12.42□□□□□ -0.42
MCF2L-216ENST00000439475 ZNF213O14771 459 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 ADCY3O60266 1144 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 FLOT1O75955 427 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 TTLL1O95922 423 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 PCP11498 1178 aaKnown RBP12.41□□□□□ -0.42
MCF2L-216ENST00000439475 PDE4AP27815 886 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 DSG3P32926 999 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 Q3C1V9 767 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-216ENST00000439475 SPICE1Q8N0Z3 855 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 SH3TC2Q8TF17 1288 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 SOCS4Q8WXH5 440 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 MKL1Q969V6 931 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 ZNF333Q96JL9 665 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 NUDT12Q9BQG2 462 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-216ENST00000439475 GABRQQ9UN88 632 aa12.41□□□□□ -0.42
MCF2L-216ENST00000439475 ZMYM6O95789 1325 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 F5H6K3 240 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 RANBP6O60518 1105 aaKnown RBP12.4□□□□□ -0.42
MCF2L-216ENST00000439475 NT5C2P49902 561 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 KLRC3Q07444 240 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 FAM47AQ5JRC9 791 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 WDR78Q5VTH9 848 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 ZNF589Q86UQ0 364 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-216ENST00000439475 CLEC10AQ8IUN9 316 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
MCF2L-216ENST00000439475 TXNRD2Q9NNW7 524 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 MTMR4Q9NYA4 1195 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 CTNNA3Q9UI47 895 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 IVNS1ABPQ9Y6Y0 642 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 DOCK3Q8IZD9 2030 aa12.4□□□□□ -0.42
MCF2L-216ENST00000439475 IGKV6D-41A0A0C4DH26 115 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-216ENST00000439475 ORC4O43929 436 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 CAPN2P17655 700 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
MCF2L-216ENST00000439475 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-216ENST00000439475 TRMT44Q8IYL2 757 aaKnown RBP12.39□□□□□ -0.43
MCF2L-216ENST00000439475 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 CEP95Q96GE4 821 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 DSCC1Q9BVC3 393 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-216ENST00000439475 ZSWIM8A7E2V4 1837 aa12.39□□□□□ -0.43
MCF2L-216ENST00000439475 FOXP2O15409 715 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 FGRP09769 529 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 CYP2B6P20813 491 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 RGS2P41220 211 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 PLS1Q14651 629 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 IMMTQ16891 758 aaKnown RBP12.38□□□□□ -0.43
MCF2L-216ENST00000439475 AKNAD1Q5T1N1 836 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 GPR142Q7Z601 462 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 GJD2Q9UKL4 321 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
MCF2L-216ENST00000439475 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
MCF2L-216ENST00000439475 RAD50Q92878 1312 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 STRNO43815 780 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 CNMDO75829 334 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 SLC25A27O95847 323 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 NDUFB10O96000 172 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-216ENST00000439475 FDX1P10109 184 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 XRCC5P13010 732 aaKnown RBP12.37□□□□□ -0.43
MCF2L-216ENST00000439475 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms