RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 WDR78Q5VTH9 848 aa13.5□□□□□ -0.25
LRTOMT-208ENST00000439209 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
LRTOMT-208ENST00000439209 NECAB2Q7Z6G3 386 aa13.5□□□□□ -0.25
LRTOMT-208ENST00000439209 TRMT44Q8IYL2 757 aaKnown RBP13.5□□□□□ -0.25
LRTOMT-208ENST00000439209 PUS7LQ9H0K6 701 aaKnown RBP13.5□□□□□ -0.25
LRTOMT-208ENST00000439209 RBM27Q9P2N5 1060 aaKnown RBP13.5□□□□□ -0.25
LRTOMT-208ENST00000439209 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 OGDHLQ9ULD0 1010 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 SLC4A4Q9Y6R1 1079 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
LRTOMT-208ENST00000439209 LAMA3Q16787 3333 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 USP17L21D6R901 530 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 PTPREP23469 700 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 CDK8P49336 464 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 ICA1Q05084 483 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 C16orf86Q6ZW13 317 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 SIAH1Q8IUQ4 282 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 AMOTL1Q8IY63 956 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 DCTPP1Q9H773 170 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
LRTOMT-208ENST00000439209 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 GRB14Q14449 540 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 COG2Q14746 738 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 IVNS1ABPQ9Y6Y0 642 aa13.47□□□□□ -0.25
LRTOMT-208ENST00000439209 PFASO15067 1338 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 LHX8Q68G74 356 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 LPAR1Q92633 364 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 MOV10L1Q9BXT6 1211 aaKnown RBP13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 SH2D4AQ9H788 454 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 ARPP21Q9UBL0 812 aaPredicted RBP13.46□□□□□ -0.25
LRTOMT-208ENST00000439209 FLOT1O75955 427 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 HOXC6P09630 235 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 DSG3P32926 999 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 OSBP2Q969R2 916 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 ATG4CQ96DT6 458 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 STRBPQ96SI9 672 aaKnown RBP13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 SPATC1LQ9H0A9 340 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 HOXC10Q9NYD6 342 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
LRTOMT-208ENST00000439209 GSG1L2A8MUP6 293 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 WDR46O15213 610 aaKnown RBP13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 ERCC3P19447 782 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 ADORA2AP29274 412 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 ATP2B2Q01814 1243 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 MFSD14CQ5VZR4 134 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 MB21D1Q8N884 522 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 SHCBP1Q8NEM2 672 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 APPBP2Q92624 585 aa13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
LRTOMT-208ENST00000439209 LTBP2Q14767 1821 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 IGHA2P01877 340 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 COL6A1P12109 1028 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 CYP2C19P33261 490 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 PLS1Q14651 629 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 SBK1Q52WX2 424 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 EPB41L4AQ9HCS5 686 aaPredicted RBP13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
LRTOMT-208ENST00000439209 M0R2C6 588 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 GPAA1O43292 621 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 CYBAP13498 195 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 SYN1P17600 705 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 RASA1P20936 1047 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 DPP9Q86TI2 863 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 NCAPG2Q86XI2 1143 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 TRPV1Q8NER1 839 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 DDX20Q9UHI6 824 aaKnown RBP13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 SMCHD1A6NHR9 2005 aa13.42□□□□□ -0.26
LRTOMT-208ENST00000439209 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms