RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 ALDH16A1Q8IZ83 802 aa11.15□□□□□ -0.62
LSMEM1-202ENST00000439068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.627e-8■■■■■ 186.3
LSMEM1-202ENST00000439068 MBIPQ9NS73 344 aa11.15□□□□□ -0.62
LSMEM1-202ENST00000439068 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
LSMEM1-202ENST00000439068 TRIM17Q9Y577 477 aa11.15□□□□□ -0.62
LSMEM1-202ENST00000439068 PAPPA2Q9BXP8 1791 aa11.15□□□□□ -0.62
LSMEM1-202ENST00000439068 MED23Q9ULK4 1368 aa11.15□□□□□ -0.63
LSMEM1-202ENST00000439068 TXLNAP40222 546 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 KCNJ4P48050 445 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 CTSWP56202 376 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 DLGAP5Q15398 846 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 LDLRAD1Q5T700 205 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 ERO1AQ96HE7 468 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 PHACTR1Q9C0D0 580 aa11.14□□□□□ -0.63
LSMEM1-202ENST00000439068 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 ZBTB39O15060 712 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 BMP1P13497 986 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 PLA2G4AP47712 749 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 POU4F2Q12837 409 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 HABP4Q5JVS0 413 aaKnown RBP11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 PRICKLE2Q7Z3G6 844 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 TTLL11Q8NHH1 800 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 RHBDD1Q8TEB9 315 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 DEFB129Q9H1M3 183 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 IFT57Q9NWB7 429 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 KLK14Q9P0G3 267 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 MAP3K2Q9Y2U5 619 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 PPP2R3BQ9Y5P8 575 aa11.13□□□□□ -0.63
LSMEM1-202ENST00000439068 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 SASH1O94885 1247 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 UPP2O95045 317 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 NPR3P17342 541 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 GPC1P35052 558 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 IREB2P48200 963 aaKnown RBP11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 MRPL14Q6P1L8 145 aaKnown RBP11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 OTOP1Q7RTM1 612 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 MXD3Q9BW11 206 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 STK31Q9BXU1 1019 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
LSMEM1-202ENST00000439068 ZNF804BA4D1E1 1349 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 PI4KAP2A4QPH2 592 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 FAM13AO94988 1023 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 PI4KAP1Q8N8J0 262 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 MYO19Q96H55 970 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 GREM2Q9H772 168 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 STIM2Q9P246 746 aa11.11□□□□□ -0.63
LSMEM1-202ENST00000439068 FIGNL2A6NMB9 653 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 RHOQP17081 205 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 MAPK1P28482 360 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 SP3Q02447 781 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 MAP3K11Q16584 847 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 TRIM46Q7Z4K8 759 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 RNF217Q8TC41 542 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 PTPN22Q9Y2R2 807 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
LSMEM1-202ENST00000439068 ANKRD33BA6NCL7 494 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 WTIPA6NIX2 430 aaPredicted RBP11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 RGS20O76081 388 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 AVPP01185 164 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 ITGA6P23229 1130 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 RBM5P52756 815 aaKnown RBP eCLIP11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 ATCAYQ86WG3 371 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 ANKRD13AQ8IZ07 590 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 CD209Q9NNX6 404 aa11.09□□□□□ -0.63
LSMEM1-202ENST00000439068 H7C1W4 665 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 TNFAIP1Q13829 316 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 RTN1Q16799 776 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 UBE3BQ7Z3V4 1068 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 ZNF804AQ7Z570 1209 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 ETFBKMTQ8IXQ9 262 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 ZBED3Q96IU2 234 aaPredicted RBP11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 MYH16Q9H6N6 1097 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 DCTN4Q9UJW0 460 aa11.08□□□□□ -0.64
LSMEM1-202ENST00000439068 COL1A1P02452 1464 aaPredicted RBP11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 NEURL1BA8MQ27 555 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 APAF1O14727 1248 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 GFRA3O60609 400 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 CRHR2Q13324 411 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 AAMPQ13685 434 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 SLC4A8Q2Y0W8 1093 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 C11orf91Q3C1V1 193 aa11.07□□□□□ -0.64
LSMEM1-202ENST00000439068 CFAP100Q494V2 611 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms