RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 PHF24Q9UPV7 400 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 ARIH1Q9Y4X5 557 aaPredicted RBP10.63□□□□□ -0.71
SCRN1-208ENST00000438497 PLXNA1Q9UIW2 1896 aa10.63□□□□□ -0.71
SCRN1-208ENST00000438497 BDP1A6H8Y1 2624 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 HLA-DOAP06340 250 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 BMP1P13497 986 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 PBX2P40425 430 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 FAAP100Q0VG06 881 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 COG2Q14746 738 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 RAB3GAP1Q15042 981 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 NAA16Q6N069 864 aaPredicted RBP10.62□□□□□ -0.71
SCRN1-208ENST00000438497 RNF180Q86T96 592 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 MOV10L1Q9BXT6 1211 aaKnown RBP10.62□□□□□ -0.71
SCRN1-208ENST00000438497 PBX4Q9BYU1 374 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 XPNPEP3Q9NQH7 507 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 SAP30BPQ9UHR5 308 aaKnown RBP10.62□□□□□ -0.71
SCRN1-208ENST00000438497 CDH23Q9H251 3354 aa10.62□□□□□ -0.71
SCRN1-208ENST00000438497 ZNFX1Q9P2E3 1918 aaKnown RBP10.61□□□□□ -0.71
SCRN1-208ENST00000438497 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 SPDYE16A6NNV3 312 aaPredicted RBP10.61□□□□□ -0.71
SCRN1-208ENST00000438497 TIMP1P01033 207 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 RARBP10826 455 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 VCAM1P19320 739 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 ADGRE1Q14246 886 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 CCDC174Q6PII3 467 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 C16orf59Q7L2K0 433 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 ACER1Q8TDN7 264 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 SSH1Q8WYL5 1049 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 TOX2Q96NM4 488 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 NECAB3Q96P71 396 aaPredicted RBP10.61□□□□□ -0.71
SCRN1-208ENST00000438497 LRFN3Q9BTN0 628 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 KIAA1683Q9H0B3 1180 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 RPAP3Q9H6T3 665 aaPredicted RBP10.61□□□□□ -0.71
SCRN1-208ENST00000438497 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 MSRAQ9UJ68 235 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 HCN4Q9Y3Q4 1203 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
SCRN1-208ENST00000438497 FLT1P17948 1338 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 SYNGAP1Q96PV0 1343 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 A0A1W2PQ45 241 aaPredicted RBP10.6□□□□□ -0.71
SCRN1-208ENST00000438497 A0A1W2PQY0 241 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 PGK1P00558 417 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 ERCC3P19447 782 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 PPIGQ13427 754 aaKnown RBP eCLIP10.6□□□□□ -0.71
SCRN1-208ENST00000438497 PLS1Q14651 629 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 CERKLQ49MI3 558 aaPredicted RBP10.6□□□□□ -0.71
SCRN1-208ENST00000438497 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 MFSD5Q6N075 450 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 TATDN1Q6P1N9 297 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 SHCBP1Q8NEM2 672 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 SPATC1LQ9H0A9 340 aa10.6□□□□□ -0.71
SCRN1-208ENST00000438497 CXXC1Q9P0U4 656 aaPredicted RBP10.6□□□□□ -0.71
SCRN1-208ENST00000438497 UQCRFS1P1P0C7P4 283 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 ARID4AP29374 1257 aaPredicted RBP10.59□□□□□ -0.71
SCRN1-208ENST00000438497 MCAMP43121 646 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 AAK1Q2M2I8 961 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 ABCB5Q2M3G0 1257 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 ZNF365Q70YC5 407 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 NCAPG2Q86XI2 1143 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 NUP133Q8WUM0 1156 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 MAML3Q96JK9 1138 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
SCRN1-208ENST00000438497 MROH8Q9H579 483 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 EPHX3Q9H6B9 360 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 SLC28A3Q9HAS3 691 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 MRS2Q9HD23 443 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 SNRKQ9NRH2 765 aa10.59□□□□□ -0.71
SCRN1-208ENST00000438497 FCER1AP12319 257 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 DYNLL1P63167 89 aaKnown RBP10.58□□□□□ -0.72
SCRN1-208ENST00000438497 RAB30Q15771 203 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 RASIP1Q5U651 963 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 ADGRA1Q86SQ6 560 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 ABRAQ8N0Z2 381 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 TMEM199Q8N511 208 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 STARD7Q9NQZ5 370 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 NRBP1Q9UHY1 535 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 SERPINB13Q9UIV8 391 aa10.58□□□□□ -0.72
SCRN1-208ENST00000438497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.58□□□□□ -0.72
SCRN1-208ENST00000438497 SRGAP3O43295 1099 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 ACRP10323 421 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 CSF2RAP15509 400 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 TAL1P17542 331 aaPredicted RBP10.57□□□□□ -0.72
SCRN1-208ENST00000438497 ACLYP53396 1101 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 TFF2Q03403 129 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 TMEM31Q5JXX7 168 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 TTC6Q86TZ1 520 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 ALYREFQ86V81 257 aaKnown RBP10.57□□□□□ -0.72
SCRN1-208ENST00000438497 MICALL1Q8N3F8 863 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 MB21D1Q8N884 522 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 TINF2Q9BSI4 451 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 NKX2-4Q9H2Z4 354 aa10.57□□□□□ -0.72
SCRN1-208ENST00000438497 FGBP02675 491 aa10.56□□□□□ -0.72
SCRN1-208ENST00000438497 DSG3P32926 999 aa10.56□□□□□ -0.72
SCRN1-208ENST00000438497 USP5P45974 858 aa10.56□□□□□ -0.72
SCRN1-208ENST00000438497 G3BP1Q13283 466 aaKnown RBP eCLIP10.56□□□□□ -0.722e-10■■■□□ 15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms