RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 PUS7LQ9H0K6 701 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 FLRT1Q9NZU1 646 aa17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 DNAH12Q6ZR08 3092 aa17.39■□□□□ 0.38
TNFRSF1A-203ENST00000437813 COL6A1P12109 1028 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 AKR1B1P15121 316 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 PTPREP23469 700 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 RGS2P41220 211 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 GRB14Q14449 540 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 C16orf86Q6ZW13 317 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 TMX2Q9Y320 296 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 NR2E3Q9Y5X4 410 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 PFASO15067 1338 aa17.39■□□□□ 0.37
TNFRSF1A-203ENST00000437813 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 USP17L21D6R901 530 aa17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 CCND3P30281 292 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 CDK8P49336 464 aa17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 CCNA1P78396 465 aa17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 ECHDC1Q9NTX5 307 aa17.38■□□□□ 0.37
TNFRSF1A-203ENST00000437813 EVI5O60447 810 aa17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 COG2Q14746 738 aa17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 CCDC17Q96LX7 622 aa17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 MOV10L1Q9BXT6 1211 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 NBPF3Q9H094 633 aa17.37■□□□□ 0.37
TNFRSF1A-203ENST00000437813 COL11A1P12107 1806 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 MPHOSPH10O00566 681 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 NPLOC4Q8TAT6 608 aa17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 LPAR1Q92633 364 aa17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 STRBPQ96SI9 672 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 VCPKMTQ9H867 229 aa17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 ADAMTS5Q9UNA0 930 aa17.36■□□□□ 0.37
TNFRSF1A-203ENST00000437813 GSG1L2A8MUP6 293 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 ICA1Q05084 483 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 SBK1Q52WX2 424 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 SHCBP1Q8NEM2 672 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 OSBP2Q969R2 916 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 GDF15Q99988 308 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 HOXC10Q9NYD6 342 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 ROBO3Q96MS0 1386 aa17.35■□□□□ 0.37
TNFRSF1A-203ENST00000437813 A0A1W2PPC1 479 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 DSG3P32926 999 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 TRPV1Q8NER1 839 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 SPATC1LQ9H0A9 340 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 C11orf49Q9H6J7 331 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 ZNFX1Q9P2E3 1918 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 PCDHB15Q9Y5E8 787 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 SLC4A4Q9Y6R1 1079 aa17.34■□□□□ 0.37
TNFRSF1A-203ENST00000437813 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 CYBAP13498 195 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 TSHZ3Q63HK5 1081 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 MB21D1Q8N884 522 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ATG4CQ96DT6 458 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 EPB41L4AQ9HCS5 686 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1A-203ENST00000437813 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 STRNO43815 780 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 COBLO75128 1261 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 RASA1P20936 1047 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 BMP8BP34820 402 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 OLFML2BQ68BL8 750 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 SPICE1Q8N0Z3 855 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 PI4K2BQ8TCG2 481 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 APPBP2Q92624 585 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 KANSL2Q9H9L4 492 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ARPP21Q9UBL0 812 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ERCC3P19447 782 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ADORA2AP29274 412 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 CYP2C19P33261 490 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 MFSD14CQ5VZR4 134 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 ABRAQ8N0Z2 381 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 REPS2Q8NFH8 660 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 SH2D4AQ9H788 454 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 STAP2Q9UGK3 403 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 IVNS1ABPQ9Y6Y0 642 aa17.31■□□□□ 0.36
TNFRSF1A-203ENST00000437813 IGKV6D-41A0A0C4DH26 115 aa17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 SOX1O00570 391 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 RNF113AO15541 343 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 FLOT1O75955 427 aa17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 TMEM132BQ14DG7 1078 aa17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 OTUD7AQ8TE49 926 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 DDX20Q9UHI6 824 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-203ENST00000437813 M0R2C6 588 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms