RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TMEM201Q5SNT2 666 aa6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 BNC2Q6ZN30 1099 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 ZNF605Q86T29 641 aa6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 CCDC84Q86UT8 332 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 INTS4Q96HW7 963 aaKnown RBP6.18□□□□□ -1.42
HMGB1P31-201ENST00000437242 ANKRD33BA6NCL7 494 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 PRRG2O14669 202 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 LRRN2O75325 713 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 SEMA7AO75326 666 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 CILPO75339 1184 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 PDE6BP35913 854 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 CHMP4BP1P59074 171 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 SPPL2CQ8IUH8 684 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 SLFN12Q8IYM2 578 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 KREMEN1Q96MU8 473 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 ASPNQ9BXN1 380 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 MCOLN1Q9GZU1 580 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 IRF2BPLQ9H1B7 796 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 PARP2Q9UGN5 583 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 KLHL3Q9UH77 587 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 GPR160Q9UJ42 338 aa6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 YBX2Q9Y2T7 364 aaKnown RBP6.17□□□□□ -1.42
HMGB1P31-201ENST00000437242 F6X3S4 739 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 PEX10O60683 326 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 DLG4P78352 724 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 LMNB2Q03252 620 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 CLEC16AQ2KHT3 1053 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
HMGB1P31-201ENST00000437242 CTSWP56202 376 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 DAB2P98082 770 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 TEKQ02763 1124 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 CAMK2GQ13555 558 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 TMEM132EQ6IEE7 984 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 PHACTR4Q8IZ21 702 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 CCDC74BQ96LY2 380 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 ASCC2Q9H1I8 757 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P31-201ENST00000437242 MYOCOSA0A1B0GUC4 107 aa6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 RBM47A0AV96 593 aaKnown RBP6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 FAM221AA4D161 298 aa6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 F13A1P00488 732 aa6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 PF4P02776 101 aa6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 XPCQ01831 940 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 SNX17Q15036 470 aa6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 CNOT6Q9ULM6 557 aaKnown RBP6.14□□□□□ -1.43
HMGB1P31-201ENST00000437242 TEX51A0A1B0GUA7 166 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 CHURC1-FNTBB4DL54 471 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 GRIN3BO60391 1043 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 HTR3BO95264 441 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 CRELD1Q96HD1 420 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 ZNF552Q9H707 407 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 PRR36Q9H6K5 1346 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 USP31Q70CQ4 1352 aa6.13□□□□□ -1.43
HMGB1P31-201ENST00000437242 RFXAPO00287 272 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 CTSHP09668 335 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 HOXA5P20719 270 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 GBP1P32455 592 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 GBP2P32456 591 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 BUD31P41223 144 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 SNAP47Q5SQN1 464 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 TMC4Q7Z404 712 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 RELL1Q8IUW5 271 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 RHOVQ96L33 236 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 TRAIPQ9BWF2 469 aa6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 POLR3KQ9Y2Y1 108 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P31-201ENST00000437242 OR14I1A6ND48 311 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 PSPNO60542 156 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 RPL10P27635 214 aaKnown RBP6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 GALK1P51570 392 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 RNF4P78317 190 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 NMIQ13287 307 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 PWP1Q13610 501 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 MLECQ14165 292 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 ZNF385BQ569K4 471 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 ADGRF1Q5T601 910 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 RNF111Q6ZNA4 994 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 SND1Q7KZF4 910 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 LINC01599Q8WXQ3 324 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 FAM161BQ96MY7 647 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 TMEM74Q96NL1 305 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 KIF2CQ99661 725 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 ZCCHC4Q9H5U6 513 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 PARD6AQ9NPB6 346 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 ZMYM5Q9UJ78 669 aa6.11□□□□□ -1.43
HMGB1P31-201ENST00000437242 USP2O75604 605 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 BMP7P18075 431 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 FAM160A1Q05DH4 1040 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 MPP2Q14168 576 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 TCERG1LQ5VWI1 586 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 WAPLQ7Z5K2 1190 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 SIRT2Q8IXJ6 389 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 ENOX1Q8TC92 643 aaKnown RBP6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 SYTL5Q8TDW5 730 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 SHISA4Q96DD7 197 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 G6PC3Q9BUM1 346 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms