RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
GABRA1-204ENST00000437025 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 PLCD1P51178 756 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 SRBD1Q8N5C6 995 aaKnown RBP12.1□□□□□ -0.47
GABRA1-204ENST00000437025 PP2D1A8MPX8 630 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 ZSCAN20P17040 1043 aaPredicted RBP12.1□□□□□ -0.47
GABRA1-204ENST00000437025 UBA7P41226 1012 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 ZNF569Q5MCW4 686 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 TGFBRAP1Q8WUH2 860 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
GABRA1-204ENST00000437025 RBL2Q08999 1139 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 TXNRD3Q86VQ6 643 aa12.1□□□□□ -0.47
GABRA1-204ENST00000437025 ACTN4O43707 911 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 MARCH6O60337 910 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 SCG2P13521 617 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 KIF5CO60282 957 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 CCDC175P0C221 793 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 CASP14P31944 242 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 KIF5BP33176 963 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 INF2Q27J81 1249 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 ENOX1Q8TC92 643 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 RBM28Q9NW13 759 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 SLFN14P0C7P3 912 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 GRIPAP1Q4V328 841 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 RIOK1Q9BRS2 568 aaKnown RBP12.09□□□□□ -0.47
GABRA1-204ENST00000437025 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
GABRA1-204ENST00000437025 LDHBP07195 334 aaKnown RBP12.08□□□□□ -0.48
GABRA1-204ENST00000437025 CALM1P0DP23 149 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 CALM2P0DP24 149 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 CALM3P0DP25 149 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 CLCN6P51797 869 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 CUL4BQ13620 913 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 MORC3Q14149 939 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 SEC23AQ15436 765 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 PKN1Q16512 942 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 CCDC178Q5BJE1 867 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 DDX41Q9UJV9 622 aaKnown RBP12.08□□□□□ -0.48
GABRA1-204ENST00000437025 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 TRERF1Q96PN7 1200 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 BSDC1Q9NW68 430 aaPredicted RBP12.08□□□□□ -0.48
GABRA1-204ENST00000437025 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 A0A0U1RQJ8 604 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 UBXN1Q04323 297 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 ACRBPQ8NEB7 543 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 ATRIPQ8WXE1 791 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 AK7Q96M32 723 aa12.08□□□□□ -0.48
GABRA1-204ENST00000437025 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
GABRA1-204ENST00000437025 DMTNQ08495 405 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 TROAPQ12815 778 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 SPATA1Q5VX52 437 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 TC2NQ8N9U0 490 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 NELFBQ8WX92 580 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 NSUN4Q96CB9 384 aaKnown RBP12.07□□□□□ -0.48
GABRA1-204ENST00000437025 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 TJP1Q07157 1748 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
GABRA1-204ENST00000437025 FERMT2Q96AC1 680 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 MAGEC2Q9UBF1 373 aaPredicted RBP12.07□□□□□ -0.48
GABRA1-204ENST00000437025 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 PKD1L3Q7Z443 1732 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 TRIM49BA6NDI0 452 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 RHOXF2BP0C7M4 288 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 RFC4P35249 363 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 PICALMQ13492 652 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 BANK1Q8NDB2 785 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 RHOXF2Q9BQY4 288 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 PHF20Q9BVI0 1012 aa12.07□□□□□ -0.48
GABRA1-204ENST00000437025 ADAMTS3O15072 1205 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 SSBP05455 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
GABRA1-204ENST00000437025 NAPAP54920 295 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 DTHD1Q6ZMT9 781 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 REXO1L1PQ8IX06 675 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
GABRA1-204ENST00000437025 STRCP1A6NGW2 1772 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
GABRA1-204ENST00000437025 KRT9P35527 623 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
GABRA1-204ENST00000437025 GUCA1BQ9UMX6 200 aa12.06□□□□□ -0.48
GABRA1-204ENST00000437025 LAMB4A4D0S4 1761 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms