RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PUS10Q3MIT2 529 aaKnown RBP8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 RUFY3Q7L099 469 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 STAG1Q8WVM7 1258 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 SNX21Q969T3 373 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 TTC14Q96N46 770 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 OSBPL5Q9H0X9 879 aaPredicted RBP8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 CYP46A1Q9Y6A2 500 aa8.32□□□□□ -1.08
LSM3P3-201ENST00000436601 ASTN2O75129 1339 aaPredicted RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 NEDD4P46934 1319 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 ZBBXA8MT70 800 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 H7C1D1 291 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 ENTPD3O75355 529 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 POLR3DP05423 398 aaPredicted RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 HIRAP54198 1017 aaPredicted RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 TCP10Q12799 353 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 KIF4BQ2VIQ3 1234 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 TBC1D10BQ4KMP7 808 aaPredicted RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 BLOC1S2Q6QNY1 142 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 MFSD6Q6ZSS7 791 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 CYB5R4Q7L1T6 521 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 MB21D2Q8IYB1 491 aaPredicted RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 NCOA7Q8NI08 942 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 DYNLL2Q96FJ2 89 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 TCEANC2Q96MN5 208 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 PDRG1Q9NUG6 133 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 FKBPLQ9UIM3 349 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 CNTNAP1P78357 1384 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 AK9Q5TCS8 1911 aa8.31□□□□□ -1.08
LSM3P3-201ENST00000436601 GLTPD2A6NH11 291 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 DDTLA6NHG4 134 aaPredicted RBP8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 B4E1Z4 1266 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 TCP10L2B9ZVM9 353 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 ORC4O43929 436 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 PRDM1O75626 825 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 SLURP2P0DP57 97 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 PCP11498 1178 aaKnown RBP8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 AK2P54819 239 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 ANTXR2P58335 489 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 FKBP1CQ5VVH2 108 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 BRICD5Q6PL45 260 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 CHST3Q7LGC8 479 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 TTC6Q86TZ1 520 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 TRPM4Q8TD43 1214 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 RNF41Q9H4P4 317 aaPredicted RBP8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 ZSWIM5Q9P217 1185 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 ROBO3Q96MS0 1386 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 ADAMTSL1Q8N6G6 1762 aa8.3□□□□□ -1.08
LSM3P3-201ENST00000436601 POTECB2RU33 542 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 PRC1O43663 620 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 MYO1BO43795 1136 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 ST18O60284 1047 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 SLC3A2P08195 630 aaKnown RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 FBXO45P0C2W1 286 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 MCM5P33992 734 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 CDK8P49336 464 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 GABPAQ06546 454 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 TRDNQ13061 729 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 TOB2Q14106 344 aaPredicted RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 PTPRNQ16849 979 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 RRP12Q5JTH9 1297 aaKnown RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 Q6ZUG5 572 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 RALYLQ86SE5 291 aaKnown RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 AMOTL1Q8IY63 956 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 SLC44A5Q8NCS7 719 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 FAM151AQ8WW52 585 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 IPO9Q96P70 1041 aaKnown RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 LRRC2Q9BYS8 371 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 KRT23Q9C075 422 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 EHD4Q9H223 541 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 DHX36Q9H2U1 1008 aaKnown RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 VEZTQ9HBM0 779 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 TMOD2Q9NZR1 351 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 HACL1Q9UJ83 578 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 SCAF8Q9UPN6 1271 aaKnown RBP8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 ATRNL1Q5VV63 1379 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 WDR19Q8NEZ3 1342 aa8.29□□□□□ -1.08
LSM3P3-201ENST00000436601 TMEM88BA6NKF7 163 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 RASA1P20936 1047 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 PDE4BQ07343 736 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 ELOAQ14241 798 aaKnown RBP8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 RASA3Q14644 834 aa8.28□□□□□ -1.08
LSM3P3-201ENST00000436601 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms