RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 COL25A1Q9BXS0 654 aaPredicted RBP22.26■■□□□ 1.15
UBXN1-203ENST00000436354 MOV10L1Q9BXT6 1211 aaKnown RBP22.26■■□□□ 1.15
UBXN1-203ENST00000436354 SLC5A4Q9NY91 659 aa22.26■■□□□ 1.15
UBXN1-203ENST00000436354 ATP11BQ9Y2G3 1177 aa22.26■■□□□ 1.15
UBXN1-203ENST00000436354 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 KBTBD13C9JR72 458 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 MPHOSPH10O00566 681 aaKnown RBP22.25■■□□□ 1.15
UBXN1-203ENST00000436354 GABPAQ06546 454 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 SLC39A5Q6ZMH5 540 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
UBXN1-203ENST00000436354 SHCBP1Q8NEM2 672 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 FAM161BQ96MY7 647 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 TANGO6Q9C0B7 1094 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 SPATC1LQ9H0A9 340 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 NAV1Q8NEY1 1877 aa22.25■■□□□ 1.15
UBXN1-203ENST00000436354 SEPT4O43236 478 aa22.24■■□□□ 1.15
UBXN1-203ENST00000436354 ERC1Q8IUD2 1116 aa22.24■■□□□ 1.15
UBXN1-203ENST00000436354 CRNKL1Q9BZJ0 848 aaKnown RBP22.24■■□□□ 1.15
UBXN1-203ENST00000436354 MCM9Q9NXL9 1143 aa22.24■■□□□ 1.15
UBXN1-203ENST00000436354 A0A1W2PRG0 241 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 ERCC3P19447 782 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 TTF1Q15361 905 aaPredicted RBP22.23■■□□□ 1.15
UBXN1-203ENST00000436354 AACSQ86V21 672 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 ITPRIPQ8IWB1 547 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 MB21D1Q8N884 522 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 MROH8Q9H579 483 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 RCAN3Q9UKA8 241 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 A0A0G2JMZ2 1700 aa22.23■■□□□ 1.15
UBXN1-203ENST00000436354 ANO1Q5XXA6 986 aa22.22■■□□□ 1.15
UBXN1-203ENST00000436354 ABRAQ8N0Z2 381 aa22.22■■□□□ 1.15
UBXN1-203ENST00000436354 PRDM5Q9NQX1 630 aaPredicted RBP22.22■■□□□ 1.15
UBXN1-203ENST00000436354 MYCNP04198 464 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-203ENST00000436354 PLS1Q14651 629 aa22.21■■□□□ 1.15
UBXN1-203ENST00000436354 SHHQ15465 462 aa22.21■■□□□ 1.15
UBXN1-203ENST00000436354 SLC9C2Q5TAH2 1124 aa22.21■■□□□ 1.15
UBXN1-203ENST00000436354 TMEM179Q6ZVK1 233 aa22.21■■□□□ 1.15
UBXN1-203ENST00000436354 UNC80Q8N2C7 3258 aa22.21■■□□□ 1.15
UBXN1-203ENST00000436354 COBLO75128 1261 aa22.2■■□□□ 1.14
UBXN1-203ENST00000436354 DSG3P32926 999 aa22.2■■□□□ 1.14
UBXN1-203ENST00000436354 SNX17Q15036 470 aa22.2■■□□□ 1.14
UBXN1-203ENST00000436354 EXOC6BQ9Y2D4 811 aa22.2■■□□□ 1.14
UBXN1-203ENST00000436354 PDE6AP16499 860 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 ADCYAP1R1P41586 468 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 TRIM60Q495X7 471 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 CEP85Q6P2H3 762 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 NCAPG2Q86XI2 1143 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 BADQ92934 168 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 CDX2Q99626 313 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-203ENST00000436354 ARHGEF10LQ9HCE6 1279 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 SWAP70Q9UH65 585 aa22.19■■□□□ 1.14
UBXN1-203ENST00000436354 MYH8P13535 1937 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 FLOT1O75955 427 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 EVX2Q03828 476 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 LRRC41Q15345 812 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 PRAMEF19Q5SWL8 479 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 C9orf50Q5SZB4 431 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 C1orf53Q5VUE5 145 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 MAML3Q96JK9 1138 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 SH2D4AQ9H788 454 aa22.18■■□□□ 1.14
UBXN1-203ENST00000436354 DCP1AQ9NPI6 582 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-203ENST00000436354 LAMA2P24043 3122 aaKnown RBP22.17■■□□□ 1.14
UBXN1-203ENST00000436354 ZNF532Q9HCE3 1301 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 RLBP1P12271 317 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 FCER1AP12319 257 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 HSP90AB4PQ58FF6 505 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 KIAA1755Q5JYT7 1200 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 SDR42E1Q8WUS8 393 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 SEMA6BQ9H3T3 888 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 PDLIM7Q9NR12 457 aa22.17■■□□□ 1.14
UBXN1-203ENST00000436354 ZNFX1Q9P2E3 1918 aaKnown RBP22.16■■□□□ 1.14
UBXN1-203ENST00000436354 SMAD3P84022 425 aaKnown RBP22.16■■□□□ 1.14
UBXN1-203ENST00000436354 FAM47AQ5JRC9 791 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 SLC44A5Q8NCS7 719 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 FERMT2Q96AC1 680 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 ATG4CQ96DT6 458 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 IL1RAPL2Q9NP60 686 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 NRBP1Q9UHY1 535 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 TMX2Q9Y320 296 aa22.16■■□□□ 1.14
UBXN1-203ENST00000436354 SLC25A27O95847 323 aa22.15■■□□□ 1.14
UBXN1-203ENST00000436354 SPICE1Q8N0Z3 855 aa22.15■■□□□ 1.14
UBXN1-203ENST00000436354 LCORLQ8N3X6 602 aa22.15■■□□□ 1.14
UBXN1-203ENST00000436354 MAFAQ8NHW3 353 aaPredicted RBP22.15■■□□□ 1.14
UBXN1-203ENST00000436354 RHPN1Q8TCX5 695 aa22.15■■□□□ 1.14
UBXN1-203ENST00000436354 VCPKMTQ9H867 229 aa22.15■■□□□ 1.14
UBXN1-203ENST00000436354 PARP14Q460N5 1801 aa22.15■■□□□ 1.14
UBXN1-203ENST00000436354 TCRBV5S4A2TA0A5A2 114 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 TRIM43BA6NCK2 446 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 GOLIM4O00461 696 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 WDR46O15213 610 aaKnown RBP22.14■■□□□ 1.13
UBXN1-203ENST00000436354 CYP2D6P10635 497 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 RARBP10826 455 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 TLE2Q04725 743 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 ICA1Q05084 483 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 SH3RF1Q7Z6J0 888 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 SIAH1Q8IUQ4 282 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.14■■□□□ 1.13
UBXN1-203ENST00000436354 TRIM43Q96BQ3 446 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-203ENST00000436354 CCDC17Q96LX7 622 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 XPNPEP3Q9NQH7 507 aa22.14■■□□□ 1.13
UBXN1-203ENST00000436354 PHF24Q9UPV7 400 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms