RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.9
VPS50-203ENST00000436177 P2RX7Q99572 595 aaKnown RBP9.4□□□□□ -0.9
VPS50-203ENST00000436177 EHD4Q9H223 541 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 IL1RAPL2Q9NP60 686 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 IVNS1ABPQ9Y6Y0 642 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 USP17L15C9J2P7 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L13C9JLJ4 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L11C9JVI0 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L18D6R9N7 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L22D6RA61 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L17D6RBQ6 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L19D6RCP7 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L20D6RJB6 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
VPS50-203ENST00000436177 ERVK-9P63128 1117 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 ERVK-24P63145 666 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 FOXK1P85037 733 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 DSG2Q14126 1118 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 CERKLQ49MI3 558 aaPredicted RBP9.39□□□□□ -0.91
VPS50-203ENST00000436177 SLC9C2Q5TAH2 1124 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 PLEKHH3Q7Z736 793 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
VPS50-203ENST00000436177 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
VPS50-203ENST00000436177 KIF1BPQ96EK5 621 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 APBA2Q99767 749 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 CRISPLD2Q9H0B8 497 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
VPS50-203ENST00000436177 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
VPS50-203ENST00000436177 RANBP2P49792 3224 aaKnown RBP9.39□□□□□ -0.91
VPS50-203ENST00000436177 LOC285556D6RIA3 1793 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 GOLIM4O00461 696 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 XRCC5P13010 732 aaKnown RBP9.38□□□□□ -0.91
VPS50-203ENST00000436177 PDE6AP16499 860 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 JAG1P78504 1218 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
VPS50-203ENST00000436177 MFSD14CQ5VZR4 134 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 GPR142Q7Z601 462 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 C7orf61Q8IZ16 206 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 HS6ST3Q8IZP7 471 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 TRIB2Q92519 343 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.38□□□□□ -0.91
VPS50-203ENST00000436177 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 TXNRD2Q9NNW7 524 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 GPHNQ9NQX3 736 aaPredicted RBP9.38□□□□□ -0.91
VPS50-203ENST00000436177 MCM9Q9NXL9 1143 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 GJD2Q9UKL4 321 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 RABGAP1Q9Y3P9 1069 aa9.38□□□□□ -0.91
VPS50-203ENST00000436177 PTPRFP10586 1907 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 A0A1W2PPC1 479 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 VCAM1P19320 739 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 RPAP2Q8IXW5 612 aaPredicted RBP9.37□□□□□ -0.91
VPS50-203ENST00000436177 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
VPS50-203ENST00000436177 C12orf42Q96LP6 360 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 TANGO6Q9C0B7 1094 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 PORCNQ9H237 461 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 C11orf49Q9H6J7 331 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 ANTXR1Q9H6X2 564 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 SH2D4AQ9H788 454 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 EMILIN3Q9NT22 766 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 PLA2G2EQ9NZK7 142 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 RBPJLQ9UBG7 517 aa9.37□□□□□ -0.91
VPS50-203ENST00000436177 ZNF532Q9HCE3 1301 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 PHIPQ8WWQ0 1821 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 TRIM32Q13049 653 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
VPS50-203ENST00000436177 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
VPS50-203ENST00000436177 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 ZMYND8Q9ULU4 1186 aaPredicted RBP9.36□□□□□ -0.91
VPS50-203ENST00000436177 MGAMO43451 1857 aa9.36□□□□□ -0.91
VPS50-203ENST00000436177 SLC15A5A6NIM6 579 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 PEX10O60683 326 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 CNGA1P29973 690 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 SHMT1P34896 483 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 SEPT2Q15019 361 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 MAP3K21Q5TCX8 1036 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 TMEM179Q6ZVK1 233 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS50-203ENST00000436177 EDC3Q96F86 508 aaKnown RBP9.35□□□□□ -0.91
VPS50-203ENST00000436177 ARHGEF10LQ9HCE6 1279 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 PAG1Q9NWQ8 432 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 HOXC10Q9NYD6 342 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 STAP2Q9UGK3 403 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 OGDHLQ9ULD0 1010 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 COG6Q9Y2V7 657 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 ATAD5Q96QE3 1844 aa9.35□□□□□ -0.91
VPS50-203ENST00000436177 RAD21O60216 631 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 MSCO60682 206 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 MBD4O95243 580 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 PLCD1P51178 756 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms