RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TRIML1Q8N9V2 468 aa19.12■□□□□ 0.65
LIMK1-203ENST00000435201 FAM163AQ96GL9 167 aaPredicted RBP19.12■□□□□ 0.65
LIMK1-203ENST00000435201 OSBPL5Q9H0X9 879 aaPredicted RBP19.12■□□□□ 0.65
LIMK1-203ENST00000435201 SERTAD1Q9UHV2 236 aa19.12■□□□□ 0.65
LIMK1-203ENST00000435201 SMC2O95347 1197 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 ISM2Q6H9L7 571 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 FOXP4Q8IVH2 680 aaPredicted RBP19.11■□□□□ 0.65
LIMK1-203ENST00000435201 MAPKAPK5Q8IW41 473 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 XPO4Q9C0E2 1151 aaKnown RBP19.11■□□□□ 0.65
LIMK1-203ENST00000435201 IFNKQ9P0W0 207 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 ACTN4O43707 911 aaKnown RBP19.11■□□□□ 0.65
LIMK1-203ENST00000435201 TRIM37O94972 964 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 MFSD14BQ5SR56 506 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 FILIP1Q7Z7B0 1213 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 TEX11Q8IYF3 940 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 SMARCE1Q969G3 411 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 POLLQ9UGP5 575 aa19.11■□□□□ 0.65
LIMK1-203ENST00000435201 FOCADQ5VW36 1801 aa19.1■□□□□ 0.65
LIMK1-203ENST00000435201 SP8Q8IXZ3 490 aa19.1■□□□□ 0.65
LIMK1-203ENST00000435201 MYRIPQ8NFW9 859 aa19.1■□□□□ 0.65
LIMK1-203ENST00000435201 MAN1B1Q9UKM7 699 aa19.1■□□□□ 0.65
LIMK1-203ENST00000435201 GAKO14976 1311 aa19.1■□□□□ 0.65
LIMK1-203ENST00000435201 FAM205AQ6ZU69 1335 aa19.1■□□□□ 0.65
LIMK1-203ENST00000435201 DYNC1I1O14576 645 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 PPEF1O14829 653 aaPredicted RBP19.09■□□□□ 0.65
LIMK1-203ENST00000435201 CBFA2T2O43439 604 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 RASA1P20936 1047 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 SARSP49591 514 aaKnown RBP19.09■□□□□ 0.65
LIMK1-203ENST00000435201 PLCD1P51178 756 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 ATP2C1P98194 919 aaPredicted RBP19.09■□□□□ 0.65
LIMK1-203ENST00000435201 FANCCQ00597 558 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 C16orf86Q6ZW13 317 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 FAM177A1Q8N128 213 aaPredicted RBP19.09■□□□□ 0.65
LIMK1-203ENST00000435201 MLKLQ8NB16 471 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 LZTS2Q9BRK4 669 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 ANKRD31Q8N7Z5 1873 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 MYH1P12882 1939 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 C6orf229H3BNL8 230 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 FOXN1O15353 648 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 LMOD1P29536 600 aaPredicted RBP19.09■□□□□ 0.65
LIMK1-203ENST00000435201 TXNRD1Q16881 649 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 CCDC150Q8NCX0 1101 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 HSD3B7Q9H2F3 369 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 SAP30BPQ9UHR5 308 aaKnown RBP19.09■□□□□ 0.65
LIMK1-203ENST00000435201 MAD2L2Q9UI95 211 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 FLT1P17948 1338 aa19.09■□□□□ 0.65
LIMK1-203ENST00000435201 NRXN2Q9P2S2 1712 aa19.08■□□□□ 0.65
LIMK1-203ENST00000435201 USP17L3A6NCW0 530 aa19.08■□□□□ 0.65
LIMK1-203ENST00000435201 USP17L4A6NCW7 530 aa19.08■□□□□ 0.65
LIMK1-203ENST00000435201 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.65
LIMK1-203ENST00000435201 SNED1Q8TER0 1413 aa19.08■□□□□ 0.64
LIMK1-203ENST00000435201 MORC3Q14149 939 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 ZNF174Q15697 407 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 GALNT17Q6IS24 598 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 PIK3AP1Q6ZUJ8 805 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 BLIDQ8IZY5 108 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 PDILTQ8N807 584 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 SLC44A5Q8NCS7 719 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 CCDC148Q8NFR7 591 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 SPATA20Q8TB22 786 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 PYM1Q9BRP8 204 aaKnown RBP19.07■□□□□ 0.64
LIMK1-203ENST00000435201 PCDHA4Q9UN74 947 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 SUGT1Q9Y2Z0 365 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 QSER1Q2KHR3 1735 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 SLFN14P0C7P3 912 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 PRR29P0C7W0 189 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 SKILP12757 684 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 BMP6P22004 513 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 CDK8P49336 464 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 RHBDL3P58872 404 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 CCZ1BP86790 482 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 CCZ1P86791 482 aaPredicted RBP19.07■□□□□ 0.64
LIMK1-203ENST00000435201 PTGDRQ13258 359 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 USP49Q70CQ1 688 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 TMC6Q7Z403 805 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 SYMPKQ92797 1274 aaKnown RBP19.07■□□□□ 0.64
LIMK1-203ENST00000435201 TMEM47Q9BQJ4 181 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 STX8Q9UNK0 236 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 ATP6V0A2Q9Y487 856 aa19.07■□□□□ 0.64
LIMK1-203ENST00000435201 BAZ2BQ9UIF8 2168 aaKnown RBP19.07■□□□□ 0.64
LIMK1-203ENST00000435201 ARID5BQ14865 1188 aa19.06■□□□□ 0.64
LIMK1-203ENST00000435201 NOM1Q5C9Z4 860 aaKnown RBP19.06■□□□□ 0.64
LIMK1-203ENST00000435201 CT47A1Q5JQC4 288 aaPredicted RBP19.06■□□□□ 0.64
LIMK1-203ENST00000435201 STAG2Q8N3U4 1231 aa19.06■□□□□ 0.64
LIMK1-203ENST00000435201 NEDD1Q8NHV4 660 aa19.06■□□□□ 0.64
LIMK1-203ENST00000435201 EYA3Q99504 573 aa19.06■□□□□ 0.64
LIMK1-203ENST00000435201 COA1Q9GZY4 146 aa19.06■□□□□ 0.64
LIMK1-203ENST00000435201 PALM3A6NDB9 673 aaPredicted RBP19.05■□□□□ 0.64
LIMK1-203ENST00000435201 WNT7AO00755 349 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 NLGN1Q8N2Q7 840 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 DAGLBQ8NCG7 672 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 DHX58Q96C10 678 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 EPSTI1Q96J88 318 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 NRDCO43847 1150 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 SERPINC1P01008 464 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 ATP1A3P13637 1013 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 GTF2F1P35269 517 aaKnown RBP eCLIP19.05■□□□□ 0.64
LIMK1-203ENST00000435201 ARL6IP4Q66PJ3 421 aaKnown RBP19.05■□□□□ 0.64
LIMK1-203ENST00000435201 SH3RF1Q7Z6J0 888 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms