RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 CERS3Q8IU89 383 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 FMNL3Q8IVF7 1028 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 UBL7Q96S82 380 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-212ENST00000434424 CAAP1Q9H8G2 361 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 FAM86C2PA6NEL3 165 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 AGRPO00253 132 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 IRS4O14654 1257 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-212ENST00000434424 SOX5P35711 763 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 STAT3P40763 770 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 CD97P48960 835 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 CDKN1CP49918 316 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-212ENST00000434424 EVA1CP58658 441 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 PABPC4Q13310 644 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRK-212ENST00000434424 GNPTABQ3T906 1256 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 TMEM201Q5SNT2 666 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 FAM117BQ6P1L5 589 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 MAP4K3Q8IVH8 894 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 SGSM3Q96HU1 749 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 KRTAP9-9Q9BYP9 154 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 KRTAP9-4Q9BYQ2 154 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 CCDC86Q9H6F5 360 aaKnown RBP9.76□□□□□ -0.85
PTPRK-212ENST00000434424 PCMTD2Q9NV79 361 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 KLHL3Q9UH77 587 aa9.76□□□□□ -0.85
PTPRK-212ENST00000434424 KCNQ2O43526 872 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 RFPL3O75679 317 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 WISP1O95388 367 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 MED26O95402 600 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 EXOSC10Q01780 885 aaKnown RBP9.75□□□□□ -0.85
PTPRK-212ENST00000434424 CYFIP1Q7L576 1253 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 KLHL6Q8WZ60 621 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 WNT8BQ93098 351 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 CCDC136Q96JN2 1154 aa9.75□□□□□ -0.85
PTPRK-212ENST00000434424 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
PTPRK-212ENST00000434424 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
PTPRK-212ENST00000434424 DNAJA2O60884 412 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 ECEL1O95672 775 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 GLB1P16278 677 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 MAOBP27338 520 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 PDE3AQ14432 1141 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 IPO9Q96P70 1041 aaKnown RBP9.74□□□□□ -0.85
PTPRK-212ENST00000434424 MCM8Q9UJA3 840 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 ADAM30Q9UKF2 790 aa9.74□□□□□ -0.85
PTPRK-212ENST00000434424 A0A087X0B3 334 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
PTPRK-212ENST00000434424 PGRP06401 933 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 NFKB2Q00653 900 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 CBX2Q14781 532 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-212ENST00000434424 DDX42Q86XP3 938 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPRK-212ENST00000434424 PSMD1Q99460 953 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 KIF2CQ99661 725 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 OSGEPQ9NPF4 335 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 KCNK4Q9NYG8 393 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 TCEAL9Q9UHQ7 104 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 ZNF214Q9UL59 606 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-212ENST00000434424 RAXQ9Y2V3 346 aa9.73□□□□□ -0.85
PTPRK-212ENST00000434424 PRAMEF27A3QJZ7 478 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 DCDC2CA8MYV0 355 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 ALG1L2C9J202 215 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 LINC01387J3KSC0 135 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 PLD2O14939 933 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 ZNF862O60290 1169 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 PDE8AO60658 829 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 NAT2P11245 290 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 RAG1P15918 1043 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 POU3F3P20264 500 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-212ENST00000434424 L1CAMP32004 1257 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 BBS9Q3SYG4 887 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 SV2CQ496J9 727 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 BRDTQ58F21 947 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-212ENST00000434424 TXNDC11Q6PKC3 985 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 ARMC10Q8N2F6 343 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 CDC6Q99741 560 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 DHRS4Q9BTZ2 278 aa9.72□□□□□ -0.85
PTPRK-212ENST00000434424 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-212ENST00000434424 NCOA5Q9HCD5 579 aaKnown RBP9.72□□□□□ -0.85
PTPRK-212ENST00000434424 CHURC1-FNTBB4DL54 471 aa9.71□□□□□ -0.86
PTPRK-212ENST00000434424 LIG1P18858 919 aa9.71□□□□□ -0.86
PTPRK-212ENST00000434424 GRK4P32298 578 aa9.71□□□□□ -0.86
PTPRK-212ENST00000434424 ZNF143P52747 638 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-212ENST00000434424 FNDC3BQ53EP0 1204 aaKnown RBP9.71□□□□□ -0.86
PTPRK-212ENST00000434424 KISS1RQ969F8 398 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-212ENST00000434424 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.86
PTPRK-212ENST00000434424 NRSN2Q9GZP1 204 aa9.71□□□□□ -0.86
PTPRK-212ENST00000434424 GOLGA2P5Q9HBQ8 144 aa9.71□□□□□ -0.86
PTPRK-212ENST00000434424 TDRD9Q8NDG6 1382 aaKnown RBP9.71□□□□□ -0.86
PTPRK-212ENST00000434424 COL17A1Q9UMD9 1497 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-212ENST00000434424 CCDC194A0A1B0GVG4 234 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 MAP4K4O95819 1239 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-212ENST00000434424 TGFB1P01137 390 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 KIF4BQ2VIQ3 1234 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 FOXB2Q5VYV0 432 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 C12orf40Q86WS4 652 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 DCAF11Q8TEB1 546 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 DHRS1Q96LJ7 313 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms