RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 DGKGP49619 791 aa13.04□□□□□ -0.32
LINC01090-202ENST00000434418 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
LINC01090-202ENST00000434418 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
LINC01090-202ENST00000434418 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
LINC01090-202ENST00000434418 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
LINC01090-202ENST00000434418 HLFQ16534 295 aa13.03□□□□□ -0.32
LINC01090-202ENST00000434418 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
LINC01090-202ENST00000434418 PSAPL1Q6NUJ1 521 aa13.03□□□□□ -0.32
LINC01090-202ENST00000434418 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
LINC01090-202ENST00000434418 SNX29Q8TEQ0 813 aa13.03□□□□□ -0.32
LINC01090-202ENST00000434418 NUDT8Q8WV74 236 aa13.03□□□□□ -0.32
LINC01090-202ENST00000434418 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01090-202ENST00000434418 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 M0R082 166 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 EREGO14944 169 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 PHACTR2O75167 634 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 SRGNP10124 158 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
LINC01090-202ENST00000434418 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
LINC01090-202ENST00000434418 ORC1Q13415 861 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 ZNF417Q8TAU3 575 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
LINC01090-202ENST00000434418 ZNF587Q96SQ5 575 aaPredicted RBP13.02□□□□□ -0.33
LINC01090-202ENST00000434418 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 WDR90Q96KV7 1748 aa13.02□□□□□ -0.33
LINC01090-202ENST00000434418 MYL6BP14649 208 aa13.01□□□□□ -0.33
LINC01090-202ENST00000434418 HTRA3P83110 453 aa13.01□□□□□ -0.33
LINC01090-202ENST00000434418 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
LINC01090-202ENST00000434418 MICALL1Q8N3F8 863 aa13.01□□□□□ -0.33
LINC01090-202ENST00000434418 CITED4Q96RK1 184 aa13.01□□□□□ -0.33
LINC01090-202ENST00000434418 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
LINC01090-202ENST00000434418 CNTNAP5Q8WYK1 1306 aa13.01□□□□□ -0.33
LINC01090-202ENST00000434418 NUP98P52948 1817 aa13□□□□□ -0.33
LINC01090-202ENST00000434418 GLTPD2A6NH11 291 aa13□□□□□ -0.33
LINC01090-202ENST00000434418 ACPPP15309 386 aa13□□□□□ -0.33
LINC01090-202ENST00000434418 CES1P23141 567 aa13□□□□□ -0.33
LINC01090-202ENST00000434418 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
LINC01090-202ENST00000434418 MASTLQ96GX5 879 aa13□□□□□ -0.33
LINC01090-202ENST00000434418 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
LINC01090-202ENST00000434418 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
LINC01090-202ENST00000434418 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
LINC01090-202ENST00000434418 ABCC12Q96J65 1359 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 FAM181BA6NEQ2 426 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 RIPK4P57078 832 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 HYAL2Q12891 473 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 RALBP1Q15311 655 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 PCSK7Q16549 785 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 KANK3Q6NY19 840 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 TPTE2Q6XPS3 522 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 JPH1Q9HDC5 661 aaPredicted RBP12.99□□□□□ -0.33
LINC01090-202ENST00000434418 TSPYL4Q9UJ04 414 aa12.99□□□□□ -0.33
LINC01090-202ENST00000434418 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 KIF4AO95239 1232 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
LINC01090-202ENST00000434418 NPR1P16066 1061 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 GPTP24298 496 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 ATP11AP98196 1134 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 ELMSAN1Q6PJG2 1045 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
LINC01090-202ENST00000434418 SMG9Q9H0W8 520 aaKnown RBP12.98□□□□□ -0.33
LINC01090-202ENST00000434418 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
LINC01090-202ENST00000434418 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
LINC01090-202ENST00000434418 VEGFAP15692 232 aaPredicted RBP12.97□□□□□ -0.33
LINC01090-202ENST00000434418 FSTL1Q12841 308 aa12.97□□□□□ -0.33
LINC01090-202ENST00000434418 LINC00114Q6XXX2 140 aa12.97□□□□□ -0.33
LINC01090-202ENST00000434418 KIF6Q6ZMV9 814 aa12.97□□□□□ -0.33
LINC01090-202ENST00000434418 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
LINC01090-202ENST00000434418 SALL4Q9UJQ4 1053 aa12.97□□□□□ -0.33
LINC01090-202ENST00000434418 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
LINC01090-202ENST00000434418 GHRHP01286 108 aa12.96□□□□□ -0.33
LINC01090-202ENST00000434418 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
LINC01090-202ENST00000434418 COL9A3Q14050 684 aaPredicted RBP12.96□□□□□ -0.33
LINC01090-202ENST00000434418 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
LINC01090-202ENST00000434418 PLD4Q96BZ4 506 aa12.96□□□□□ -0.33
LINC01090-202ENST00000434418 DMRTB1Q96MA1 342 aa12.96□□□□□ -0.33
LINC01090-202ENST00000434418 ZFYVE28Q9HCC9 887 aa12.96□□□□□ -0.33
LINC01090-202ENST00000434418 KLRG2A4D1S0 409 aaPredicted RBP12.95□□□□□ -0.34
LINC01090-202ENST00000434418 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 RGS9O75916 674 aaPredicted RBP12.95□□□□□ -0.34
LINC01090-202ENST00000434418 ANXA1P04083 346 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
LINC01090-202ENST00000434418 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 ASB16Q96NS5 453 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 LATS2Q9NRM7 1088 aa12.95□□□□□ -0.34
LINC01090-202ENST00000434418 TRPA1O75762 1119 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 DDNO94850 711 aaPredicted RBP12.94□□□□□ -0.34
LINC01090-202ENST00000434418 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 SLC51AQ86UW1 340 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 CEP120Q8N960 986 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 TRIM11Q96F44 468 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 RASSF4Q9H2L5 321 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms