RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 CD97P48960 835 aa8.7□□□□□ -1.02
HDAC9-213ENST00000433709 MLECQ14165 292 aa8.7□□□□□ -1.02
HDAC9-213ENST00000433709 ARSHQ5FYA8 562 aa8.7□□□□□ -1.02
HDAC9-213ENST00000433709 RASGRP4Q8TDF6 673 aa8.7□□□□□ -1.02
HDAC9-213ENST00000433709 PPP1R13LQ8WUF5 828 aa8.7□□□□□ -1.02
HDAC9-213ENST00000433709 GMIPQ9P107 970 aa8.7□□□□□ -1.02
HDAC9-213ENST00000433709 TPX2Q9ULW0 747 aaKnown RBP8.7□□□□□ -1.02
HDAC9-213ENST00000433709 RANGAP1P46060 587 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-213ENST00000433709 OVOS1Q6IE37 1185 aa8.69□□□□□ -1.02
HDAC9-213ENST00000433709 INTS5Q6P9B9 1019 aaKnown RBP8.69□□□□□ -1.02
HDAC9-213ENST00000433709 DNAJB8Q8NHS0 232 aa8.69□□□□□ -1.02
HDAC9-213ENST00000433709 BAHD1Q8TBE0 780 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-213ENST00000433709 CYB5D2Q8WUJ1 264 aa8.69□□□□□ -1.02
HDAC9-213ENST00000433709 KIF2CQ99661 725 aa8.69□□□□□ -1.02
HDAC9-213ENST00000433709 PRDM5Q9NQX1 630 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-213ENST00000433709 GTF2IRD1Q9UHL9 959 aa8.69□□□□□ -1.02
HDAC9-213ENST00000433709 SCO2A0A1W2PP80 73 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 OXCT1P55809 520 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 CCDC81Q6ZN84 652 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 PLD6Q8N2A8 252 aaKnown RBP8.68□□□□□ -1.02
HDAC9-213ENST00000433709 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 FERD3LQ96RJ6 166 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 CEP131Q9UPN4 1083 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 NEO1Q92859 1461 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 ARAP3Q8WWN8 1544 aa8.68□□□□□ -1.02
HDAC9-213ENST00000433709 IGF2BP3O00425 579 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC9-213ENST00000433709 HYAL3O43820 417 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-213ENST00000433709 ITIH2P19823 946 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 SOX9P48436 509 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 PPRC1Q5VV67 1664 aaKnown RBP8.67□□□□□ -1.02
HDAC9-213ENST00000433709 ARHGAP27Q6ZUM4 889 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 PHACTR4Q8IZ21 702 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 TMEM40Q8WWA1 233 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 CCDC74BQ96LY2 380 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
HDAC9-213ENST00000433709 ABCA9Q8IUA7 1624 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 NUP153P49790 1475 aaKnown RBP8.66□□□□□ -1.02
HDAC9-213ENST00000433709 FHOD3Q2V2M9 1422 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 PRR33A8MZF0 331 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 RAG1P15918 1043 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-213ENST00000433709 COL9A2Q14055 689 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-213ENST00000433709 LRP8Q14114 963 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 CNNM2Q9H8M5 875 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 PCMTD2Q9NV79 361 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 MAPK8IP1Q9UQF2 711 aa8.66□□□□□ -1.02
HDAC9-213ENST00000433709 KIAA1324LA8MWY0 1029 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-213ENST00000433709 RGS13O14921 159 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 CBX7O95931 251 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 SPINK2P20155 84 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
HDAC9-213ENST00000433709 LRRFIP1Q32MZ4 808 aaKnown RBP8.65□□□□□ -1.02
HDAC9-213ENST00000433709 ARTNQ5T4W7 220 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 CDCP2Q5VXM1 449 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 NLRC3Q7RTR2 1065 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 DTX1Q86Y01 620 aa8.65□□□□□ -1.02
HDAC9-213ENST00000433709 MEIS3P2A8K0S8 358 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 GNAT3A8MTJ3 354 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 IMPDH2P12268 514 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 NME1P15531 152 aaKnown RBP8.64□□□□□ -1.03
HDAC9-213ENST00000433709 GBP1P32455 592 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 ETV3P41162 512 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 ZNF746Q6NUN9 644 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-213ENST00000433709 NETO1Q8TDF5 533 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 MKNK2Q9HBH9 465 aa8.64□□□□□ -1.03
HDAC9-213ENST00000433709 COL17A1Q9UMD9 1497 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-213ENST00000433709 CLIP1P30622 1438 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 UBOX5O94941 541 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 CEACAM5P06731 702 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 ATF4P18848 351 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-213ENST00000433709 NKPD1Q17RQ9 610 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 RUFY4Q6ZNE9 571 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 SLC9A7Q96T83 725 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 BSDC1Q9NW68 430 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-213ENST00000433709 CFAP74Q9C0B2 1584 aa8.63□□□□□ -1.03
HDAC9-213ENST00000433709 HECW1Q76N89 1606 aa8.62□□□□□ -1.03
HDAC9-213ENST00000433709 CYP7A1P22680 504 aa8.62□□□□□ -1.03
HDAC9-213ENST00000433709 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
HDAC9-213ENST00000433709 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
HDAC9-213ENST00000433709 SPACA3Q8IXA5 215 aa8.62□□□□□ -1.03
HDAC9-213ENST00000433709 KREMEN1Q96MU8 473 aa8.62□□□□□ -1.03
HDAC9-213ENST00000433709 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
HDAC9-213ENST00000433709 CAPN6Q9Y6Q1 641 aa8.62□□□□□ -1.03
HDAC9-213ENST00000433709 FAM86C2PA6NEL3 165 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 LRRN2O75325 713 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 ZNF865P0CJ78 1059 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-213ENST00000433709 ACRP10323 421 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
HDAC9-213ENST00000433709 EFCAB2Q5VUJ9 269 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 LSRQ86X29 649 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-213ENST00000433709 Q8N3U1 123 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms