RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CDC27P30260 824 aa30.87■■■□□ 2.53
TMEM248-205ENST00000433271 ADD1P35611 737 aaKnown RBP30.87■■■□□ 2.53
TMEM248-205ENST00000433271 CHADLQ6NUI6 762 aa30.87■■■□□ 2.53
TMEM248-205ENST00000433271 CTCFLQ8NI51 663 aaPredicted RBP30.87■■■□□ 2.53
TMEM248-205ENST00000433271 PICK1Q9NRD5 415 aa30.87■■■□□ 2.53
TMEM248-205ENST00000433271 ATAD5Q96QE3 1844 aa30.87■■■□□ 2.53
TMEM248-205ENST00000433271 CPLX1O14810 134 aa30.86■■■□□ 2.53
TMEM248-205ENST00000433271 RBM28Q9NW13 759 aaKnown RBP30.86■■■□□ 2.53
TMEM248-205ENST00000433271 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.86■■■□□ 2.53
TMEM248-205ENST00000433271 MYH4Q9Y623 1939 aa30.85■■■□□ 2.53
TMEM248-205ENST00000433271 USP17L5A8MUK1 530 aa30.85■■■□□ 2.53
TMEM248-205ENST00000433271 KIF5BP33176 963 aa30.85■■■□□ 2.53
TMEM248-205ENST00000433271 MAP3K11Q16584 847 aa30.85■■■□□ 2.53
TMEM248-205ENST00000433271 TMX2Q9Y320 296 aa30.85■■■□□ 2.53
TMEM248-205ENST00000433271 DOCK1Q14185 1865 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 A0A1W2PRG0 241 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 GRM4Q14833 912 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.84■■■□□ 2.53
TMEM248-205ENST00000433271 GMCL1P1Q8NEA9 526 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 SH2D4AQ9H788 454 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 CTDNEP1O95476 244 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 TTLL12Q14166 644 aaPredicted RBP30.84■■■□□ 2.53
TMEM248-205ENST00000433271 CPLX2Q6PUV4 134 aaKnown RBP30.84■■■□□ 2.53
TMEM248-205ENST00000433271 NSUN7Q8NE18 718 aaKnown RBP30.84■■■□□ 2.53
TMEM248-205ENST00000433271 ACER1Q8TDN7 264 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 CWC22Q9HCG8 908 aaKnown RBP30.84■■■□□ 2.53
TMEM248-205ENST00000433271 SMC3Q9UQE7 1217 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 MTMR7Q9Y216 660 aa30.84■■■□□ 2.53
TMEM248-205ENST00000433271 SNHG28P0DPA3 235 aa30.83■■■□□ 2.53
TMEM248-205ENST00000433271 PDHBP11177 359 aa30.83■■■□□ 2.53
TMEM248-205ENST00000433271 PTPRAP18433 802 aa30.83■■■□□ 2.53
TMEM248-205ENST00000433271 ARMC9Q7Z3E5 817 aa30.83■■■□□ 2.53
TMEM248-205ENST00000433271 CDKL5O76039 1030 aa30.82■■■□□ 2.52
TMEM248-205ENST00000433271 ECE1P42892 770 aa30.82■■■□□ 2.52
TMEM248-205ENST00000433271 NTRK3Q16288 839 aa30.82■■■□□ 2.52
TMEM248-205ENST00000433271 MAD2L2Q9UI95 211 aa30.82■■■□□ 2.52
TMEM248-205ENST00000433271 CSADQ9Y600 493 aa30.82■■■□□ 2.52
TMEM248-205ENST00000433271 F5H6K3 240 aa30.81■■■□□ 2.52
TMEM248-205ENST00000433271 ITGBL1O95965 494 aaPredicted RBP30.81■■■□□ 2.52
TMEM248-205ENST00000433271 FMR1Q06787 632 aaKnown RBP eCLIP30.81■■■□□ 2.527e-6■□□□□ 8.9
TMEM248-205ENST00000433271 KLRC3Q07444 240 aa30.81■■■□□ 2.52
TMEM248-205ENST00000433271 VGLL4Q14135 290 aa30.81■■■□□ 2.52
TMEM248-205ENST00000433271 CCDC84Q86UT8 332 aaPredicted RBP30.81■■■□□ 2.52
TMEM248-205ENST00000433271 ANKRD13AQ8IZ07 590 aa30.81■■■□□ 2.52
TMEM248-205ENST00000433271 SMARCC2Q8TAQ2 1214 aa30.81■■■□□ 2.52
TMEM248-205ENST00000433271 WDR18Q9BV38 432 aa30.81■■■□□ 2.52
TMEM248-205ENST00000433271 PALM3A6NDB9 673 aaPredicted RBP30.8■■■□□ 2.52
TMEM248-205ENST00000433271 PARP1P09874 1014 aaKnown RBP30.8■■■□□ 2.52
TMEM248-205ENST00000433271 GNAQP50148 359 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 IFNAR1P17181 557 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 SLFN13Q68D06 897 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 USP17L2Q6R6M4 530 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 TMTC3Q6ZXV5 915 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 MOB2Q70IA6 237 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 ZNF408Q9H9D4 720 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 AS3MTQ9HBK9 375 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 GOPCQ9HD26 462 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 SNCAIPQ9Y6H5 919 aa30.8■■■□□ 2.52
TMEM248-205ENST00000433271 PAPPA2Q9BXP8 1791 aa30.79■■■□□ 2.52
TMEM248-205ENST00000433271 PTPDC1A2A3K4 754 aa30.79■■■□□ 2.52
TMEM248-205ENST00000433271 JAK2O60674 1132 aa30.79■■■□□ 2.52
TMEM248-205ENST00000433271 FKBP1BP68106 108 aa30.79■■■□□ 2.52
TMEM248-205ENST00000433271 HMGN5P82970 282 aaKnown RBP30.79■■■□□ 2.52
TMEM248-205ENST00000433271 DCAF4Q8WV16 495 aa30.79■■■□□ 2.52
TMEM248-205ENST00000433271 GMCL1Q96IK5 515 aa30.79■■■□□ 2.52
TMEM248-205ENST00000433271 KIF3CO14782 793 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 GJB2P29033 226 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 ASPRV1Q53RT3 343 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 RASGRP2Q7LDG7 609 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 STAG2Q8N3U4 1231 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 LZTS2Q9BRK4 669 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 ZHX2Q9Y6X8 837 aa30.78■■■□□ 2.52
TMEM248-205ENST00000433271 UNCXA6NJT0 531 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 DTNBO60941 627 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 NDUFB10O96000 172 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 ZNF543Q08ER8 600 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 LDLRAD1Q5T700 205 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 FEZ1Q99689 392 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 KIAA1683Q9H0B3 1180 aa30.77■■■□□ 2.52
TMEM248-205ENST00000433271 RAD21O60216 631 aa30.76■■■□□ 2.52
TMEM248-205ENST00000433271 PLEKHA8P1O95397 391 aa30.76■■■□□ 2.52
TMEM248-205ENST00000433271 DDIT3P35638 169 aa30.76■■■□□ 2.52
TMEM248-205ENST00000433271 CMTR1Q8N1G2 835 aaKnown RBP30.76■■■□□ 2.52
TMEM248-205ENST00000433271 ZNF280CQ8ND82 737 aa30.76■■■□□ 2.52
TMEM248-205ENST00000433271 VCPKMTQ9H867 229 aa30.76■■■□□ 2.52
TMEM248-205ENST00000433271 USP17L10C9JJH3 530 aa30.76■■■□□ 2.51
TMEM248-205ENST00000433271 KLRF2D3W0D1 207 aa30.76■■■□□ 2.51
TMEM248-205ENST00000433271 CELF2O95319 508 aaKnown RBP30.76■■■□□ 2.51
TMEM248-205ENST00000433271 GOLGA8HP0CJ92 632 aa30.76■■■□□ 2.51
TMEM248-205ENST00000433271 SLC1A4P43007 532 aa30.76■■■□□ 2.51
TMEM248-205ENST00000433271 FUT2Q10981 343 aa30.76■■■□□ 2.51
TMEM248-205ENST00000433271 GPATCH4Q5T3I0 446 aaKnown RBP30.76■■■□□ 2.51
TMEM248-205ENST00000433271 NBPF11Q86T75 865 aa30.76■■■□□ 2.51
TMEM248-205ENST00000433271 SRBD1Q8N5C6 995 aaKnown RBP30.76■■■□□ 2.51
TMEM248-205ENST00000433271 OTOFQ9HC10 1997 aa30.75■■■□□ 2.51
TMEM248-205ENST00000433271 UBE2Q2LH0YL09 131 aa30.75■■■□□ 2.51
TMEM248-205ENST00000433271 SPP2Q13103 211 aa30.75■■■□□ 2.51
TMEM248-205ENST00000433271 CCDC82Q8N4S0 544 aa30.75■■■□□ 2.51
TMEM248-205ENST00000433271 PHKBQ93100 1093 aa30.75■■■□□ 2.51
TMEM248-205ENST00000433271 DDX11Q96FC9 970 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms