RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
HDAC4-202ENST00000430200 SLC4A4Q9Y6R1 1079 aa14.21□□□□□ -0.13
HDAC4-202ENST00000430200 COL6A3P12111 3177 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 FOXP2O15409 715 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
HDAC4-202ENST00000430200 TMEM179Q6ZVK1 233 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 SOCS4Q8WXH5 440 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 STRBPQ96SI9 672 aaKnown RBP14.2□□□□□ -0.14
HDAC4-202ENST00000430200 SEC62Q99442 399 aaKnown RBP14.2□□□□□ -0.14
HDAC4-202ENST00000430200 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 RABGAP1Q9Y3P9 1069 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
HDAC4-202ENST00000430200 CCND3P30281 292 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-202ENST00000430200 MAPK4P31152 587 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
HDAC4-202ENST00000430200 USP14P54578 494 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 ICA1Q05084 483 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 CACNB2Q08289 660 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-202ENST00000430200 PLEKHH3Q7Z736 793 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 STK11IPQ8N1F8 1099 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 PAWRQ96IZ0 340 aaKnown RBP14.19□□□□□ -0.14
HDAC4-202ENST00000430200 APBA2Q99767 749 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 PRO3102Q9H379 93 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
HDAC4-202ENST00000430200 PFASO15067 1338 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 IGHA2P01877 340 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
HDAC4-202ENST00000430200 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-202ENST00000430200 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 NPLOC4Q8TAT6 608 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 APPBP2Q92624 585 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 ATG4CQ96DT6 458 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 NUDT12Q9BQG2 462 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 FBXO28Q9NVF7 368 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 TMX2Q9Y320 296 aa14.18□□□□□ -0.14
HDAC4-202ENST00000430200 RPTORQ8N122 1335 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 GPAA1O43292 621 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 EEF2P13639 858 aaKnown RBP14.17□□□□□ -0.14
HDAC4-202ENST00000430200 RASA1P20936 1047 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 GRB14Q14449 540 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 TRPV1Q8NER1 839 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 GTF3C2Q8WUA4 911 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-202ENST00000430200 MOV10L1Q9BXT6 1211 aaKnown RBP14.17□□□□□ -0.14
HDAC4-202ENST00000430200 VCPKMTQ9H867 229 aa14.17□□□□□ -0.14
HDAC4-202ENST00000430200 RNF113AO15541 343 aaKnown RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 PTPREP23469 700 aa14.16□□□□□ -0.14
HDAC4-202ENST00000430200 RGS2P41220 211 aa14.16□□□□□ -0.14
HDAC4-202ENST00000430200 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
HDAC4-202ENST00000430200 LHX8Q68G74 356 aa14.16□□□□□ -0.14
HDAC4-202ENST00000430200 DPF3Q92784 378 aa14.16□□□□□ -0.14
HDAC4-202ENST00000430200 YTHDC1Q96MU7 727 aaKnown RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 RBM27Q9P2N5 1060 aaKnown RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 ARPP21Q9UBL0 812 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-202ENST00000430200 OGDHLQ9ULD0 1010 aa14.16□□□□□ -0.14
HDAC4-202ENST00000430200 SBK1Q52WX2 424 aa14.15□□□□□ -0.14
HDAC4-202ENST00000430200 CCDC129Q6ZRS4 1044 aa14.15□□□□□ -0.14
HDAC4-202ENST00000430200 GCC1Q96CN9 775 aa14.15□□□□□ -0.14
HDAC4-202ENST00000430200 SPATC1LQ9H0A9 340 aa14.15□□□□□ -0.14
HDAC4-202ENST00000430200 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
HDAC4-202ENST00000430200 EYSQ5T1H1 3165 aa14.15□□□□□ -0.14
HDAC4-202ENST00000430200 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.15
HDAC4-202ENST00000430200 PLIN4Q96Q06 1357 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 PRDM1O75626 825 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 FLOT1O75955 427 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 ERCC3P19447 782 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 MX1P20591 662 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 DSG3P32926 999 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 CYP2C19P33261 490 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 TMEM132BQ14DG7 1078 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 ZSCAN25Q6NSZ9 544 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-202ENST00000430200 RASGRP2Q7LDG7 609 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 REPS2Q8NFH8 660 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 ARHGEF10LQ9HCE6 1279 aa14.14□□□□□ -0.15
HDAC4-202ENST00000430200 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 WDR46O15213 610 aaKnown RBP14.13□□□□□ -0.15
HDAC4-202ENST00000430200 COBLO75128 1261 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 HOXC6P09630 235 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 COL6A1P12109 1028 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 ADORA2AP29274 412 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 ATP2B2Q01814 1243 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 COG2Q14746 738 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 ZMYM1Q5SVZ6 1142 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 FAM83BQ5T0W9 1011 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 LPAR1Q92633 364 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 GPATCH3Q96I76 525 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 CCDC17Q96LX7 622 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 HTATIP2Q9BUP3 242 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 CDH23Q9H251 3354 aa14.13□□□□□ -0.15
HDAC4-202ENST00000430200 CYBAP13498 195 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms