RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 GTF2IP78347 998 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 NCAPHQ15003 741 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 USP49Q70CQ1 688 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
MBD4-203ENST00000429544 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
MBD4-203ENST00000429544 SLF2Q8IX21 1173 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 PDILTQ8N807 584 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 PCDHA5Q9Y5H7 936 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 TPM2P07951 284 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 TPM4P67936 248 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 ZNF174Q15697 407 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 TTC38Q5R3I4 469 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 TCP11L1Q9NUJ3 509 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 HOOK1Q9UJC3 728 aaKnown RBP18.57■□□□□ 0.56
MBD4-203ENST00000429544 ATP6V0A2Q9Y487 856 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 GAKO14976 1311 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 FAM205AQ6ZU69 1335 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 ADAMTS3O15072 1205 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
MBD4-203ENST00000429544 CDK8P49336 464 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 MDM2Q00987 491 aaPredicted RBP18.57■□□□□ 0.56
MBD4-203ENST00000429544 OLFM4Q6UX06 510 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
MBD4-203ENST00000429544 GPKOWQ92917 476 aaPredicted RBP eCLIP18.57■□□□□ 0.562e-7■■■□□ 18.7
MBD4-203ENST00000429544 MAD2L2Q9UI95 211 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
MBD4-203ENST00000429544 PRR29P0C7W0 189 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 POSTNQ15063 836 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 PIK3AP1Q6ZUJ8 805 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 C16orf86Q6ZW13 317 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 GRAMD1CQ8IYS0 662 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 FAM163AQ96GL9 167 aaPredicted RBP18.56■□□□□ 0.56
MBD4-203ENST00000429544 TMEM47Q9BQJ4 181 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 MORC2Q9Y6X9 1032 aaPredicted RBP18.56■□□□□ 0.56
MBD4-203ENST00000429544 ELOA2Q8IYF1 753 aaPredicted RBP18.56■□□□□ 0.56
MBD4-203ENST00000429544 EYA3Q99504 573 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 ZNF287Q9HBT7 754 aa18.56■□□□□ 0.56
MBD4-203ENST00000429544 IKBKBO14920 756 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 SMC2O95347 1197 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 BMP15O95972 392 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 TERF1P54274 439 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 ARID5BQ14865 1188 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 NLGN1Q8N2Q7 840 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 IFNKQ9P0W0 207 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 DAGLAQ9Y4D2 1042 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 ACTN4O43707 911 aaKnown RBP18.55■□□□□ 0.56
MBD4-203ENST00000429544 SRGNP10124 158 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 GNAQP50148 359 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 FILIP1Q7Z7B0 1213 aa18.55■□□□□ 0.56
MBD4-203ENST00000429544 F8W031 263 aaPredicted RBP18.54■□□□□ 0.56
MBD4-203ENST00000429544 APBA3O96018 575 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 NPR1P16066 1061 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 HMGB2P26583 209 aaKnown RBP18.54■□□□□ 0.56
MBD4-203ENST00000429544 LMOD1P29536 600 aaPredicted RBP18.54■□□□□ 0.56
MBD4-203ENST00000429544 SLC35G1Q2M3R5 365 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 EPSTI1Q96J88 318 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
MBD4-203ENST00000429544 COA1Q9GZY4 146 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 MAN1B1Q9UKM7 699 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 RASGRP2Q7LDG7 609 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 FERMT2Q96AC1 680 aa18.54■□□□□ 0.56
MBD4-203ENST00000429544 A0A087X0B3 334 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 BMP6P22004 513 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 CALML3P27482 149 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 MYL5Q02045 173 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 PTGDRQ13258 359 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 BLIDQ8IZY5 108 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 SYMPKQ92797 1274 aaKnown RBP18.53■□□□□ 0.56
MBD4-203ENST00000429544 DHX58Q96C10 678 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 ADAMTSL1Q8N6G6 1762 aa18.53■□□□□ 0.56
MBD4-203ENST00000429544 LRRC8AQ8IWT6 810 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 SMARCE1Q969G3 411 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 HSD3B7Q9H2F3 369 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 MYH8P13535 1937 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 ATP2C1P98194 919 aaPredicted RBP18.52■□□□□ 0.56
MBD4-203ENST00000429544 PICALMQ13492 652 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 DOK7Q18PE1 504 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 NEDD1Q8NHV4 660 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 ZC3H12CQ9C0D7 883 aaKnown RBP18.52■□□□□ 0.56
MBD4-203ENST00000429544 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.56
MBD4-203ENST00000429544 UQCRHLA0A096LP55 91 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 VWA3AA6NCI4 1184 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 PLSCR1O15162 318 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 CYTH3O43739 400 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 UQCRHP07919 91 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 MMP10P09238 476 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 ATP1A3P13637 1013 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 MCM7P33993 719 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 FANCCQ00597 558 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 TYW1BQ6NUM6 668 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 KANK3Q6NY19 840 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
MBD4-203ENST00000429544 CERS5Q8N5B7 392 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 RASGRP4Q8TDF6 673 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 MXD3Q9BW11 206 aa18.51■□□□□ 0.55
MBD4-203ENST00000429544 PALM3A6NDB9 673 aaPredicted RBP18.51■□□□□ 0.55
MBD4-203ENST00000429544 TRAPPC10P48553 1259 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms