RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 ECM29Q5VYK3 1845 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 TTC26A0AVF1 554 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 SLC7A5Q01650 507 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 KCTD16Q68DU8 428 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 KANK3Q6NY19 840 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 SH3GL2Q99962 352 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 GPR108Q9NPR9 543 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 STRN4Q9NRL3 753 aa18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
RHBDF1-204ENST00000428730 USP8P40818 1118 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 SAFBQ15424 915 aaKnown RBP eCLIP18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 SMARCAL1Q9NZC9 954 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 WDR19Q8NEZ3 1342 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 TDO2P48775 406 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 PPARDQ03181 441 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 SYMPKQ92797 1274 aaKnown RBP18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 CABS1Q96KC9 395 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 FAM184BQ9ULE4 1060 aa18.44■□□□□ 0.54
RHBDF1-204ENST00000428730 WNT7AO00755 349 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 KDM6AO15550 1401 aaPredicted RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 ZEB2O60315 1214 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 MATR3P43243 847 aaKnown RBP eCLIP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 ATP2B2Q01814 1243 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 UBXN1Q04323 297 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 RILPL1Q5EBL4 403 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 HAUS4Q9H6D7 363 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 JADE2Q9NQC1 790 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 MACROD2A1Z1Q3 448 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 PES1O00541 588 aaKnown RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 FMNL1O95466 1100 aaPredicted RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 SCP2P22307 547 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 GPTP24298 496 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 GBP6Q6ZN66 633 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 ZNF579Q8NAF0 562 aaKnown RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 LRRC1Q9BTT6 524 aa18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 LIMA1Q9UHB6 759 aaKnown RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 AFDNP55196 1824 aaKnown RBP18.43■□□□□ 0.54
RHBDF1-204ENST00000428730 RRAGBQ5VZM2 374 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 OTUD6BQ8N6M0 293 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 KCNJ18B7U540 433 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 SEMA3EO15041 775 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 CKAP4Q07065 602 aaKnown RBP18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 KCNJ12Q14500 433 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 WDR59Q6PJI9 974 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 SH3RF1Q7Z6J0 888 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 KIAA1328Q86T90 577 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 NFAT5O94916 1531 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 SMCR8Q8TEV9 937 aaPredicted RBP18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 PSMB7Q99436 277 aa18.42■□□□□ 0.54
RHBDF1-204ENST00000428730 IDEP14735 1019 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 TCP11X2Q5H9J9 407 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 SLC52A2Q9HAB3 445 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 EHD2Q9NZN4 543 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 UBR1Q8IWV7 1749 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 H7C1W4 665 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 IFIT3O14879 490 aaKnown RBP18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 KIAA0754O94854 1291 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 CYP27A1Q02318 531 aa18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 ZKSCAN4Q969J2 545 aaPredicted RBP18.41■□□□□ 0.54
RHBDF1-204ENST00000428730 APBA1Q02410 837 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 SHISA4Q96DD7 197 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 GOLGA8KD6RF30 607 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 CLGNO14967 610 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 KRT14P02533 472 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 OR8K1Q8NGG5 319 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 FOXP1Q9H334 677 aaPredicted RBP18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 XDHP47989 1333 aa18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 MYO5AQ9Y4I1 1855 aaKnown RBP18.4■□□□□ 0.54
RHBDF1-204ENST00000428730 hCG_1642624A0A1W2PR95 340 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 TRIM49BA6NDI0 452 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 LRRC10BA6NIK2 292 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 MEFVO15553 781 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 KCNA6P17658 529 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 GUCY1A3Q02108 690 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 NELFBQ8WX92 580 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 GSDMAQ96QA5 445 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 ZSWIM5Q9P217 1185 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 ECM2O94769 699 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 IFNAR1P17181 557 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 ACTN3Q08043 901 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 RNF187Q5TA31 235 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
RHBDF1-204ENST00000428730 GPIHBP1Q8IV16 184 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms