RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 GPR25O00155 361 aa27.69■■■□□ 2.02
GLI3-202ENST00000428534 REC8O95072 547 aa27.69■■■□□ 2.02
GLI3-202ENST00000428534 IRX3P78415 501 aaPredicted RBP27.69■■■□□ 2.02
GLI3-202ENST00000428534 USP17L24Q0WX57 530 aa27.69■■■□□ 2.02
GLI3-202ENST00000428534 ZYXQ15942 572 aaKnown RBP27.69■■■□□ 2.02
GLI3-202ENST00000428534 RNF20Q5VTR2 975 aa27.69■■■□□ 2.02
GLI3-202ENST00000428534 TBC1D10CQ8IV04 446 aa27.69■■■□□ 2.02
GLI3-202ENST00000428534 GTF3C2Q8WUA4 911 aaPredicted RBP27.69■■■□□ 2.02
GLI3-202ENST00000428534 CEP95Q96GE4 821 aa27.69■■■□□ 2.02
GLI3-202ENST00000428534 RBM8AQ9Y5S9 174 aaKnown RBP27.69■■■□□ 2.02
GLI3-202ENST00000428534 A0A1W2PRG0 241 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 SOX10P56693 466 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 TREML2Q5T2D2 321 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 IQCA1Q86XH1 822 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 SIAH1Q8IUQ4 282 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 SMCR8Q8TEV9 937 aaPredicted RBP27.68■■■□□ 2.02
GLI3-202ENST00000428534 NBPF3Q9H094 633 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 CLIP2Q9UDT6 1046 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 PTPRFP10586 1907 aa27.68■■■□□ 2.02
GLI3-202ENST00000428534 EPB41L2O43491 1005 aaKnown RBP27.67■■■□□ 2.02
GLI3-202ENST00000428534 GCLCP48506 637 aaPredicted RBP27.67■■■□□ 2.02
GLI3-202ENST00000428534 ARHGEF6Q15052 776 aa27.67■■■□□ 2.02
GLI3-202ENST00000428534 TTC14Q96N46 770 aa27.67■■■□□ 2.02
GLI3-202ENST00000428534 INCENPQ9NQS7 918 aa27.67■■■□□ 2.02
GLI3-202ENST00000428534 LOC285556D6RIA3 1793 aa27.67■■■□□ 2.02
GLI3-202ENST00000428534 FKTNO75072 461 aa27.66■■■□□ 2.02
GLI3-202ENST00000428534 CYP21A2P08686 494 aa27.66■■■□□ 2.02
GLI3-202ENST00000428534 VCAM1P19320 739 aa27.66■■■□□ 2.02
GLI3-202ENST00000428534 ZNF296Q8WUU4 475 aaPredicted RBP27.66■■■□□ 2.02
GLI3-202ENST00000428534 GREB1LQ9C091 1923 aaPredicted RBP27.65■■■□□ 2.02
GLI3-202ENST00000428534 LAMA4Q16363 1823 aa27.65■■■□□ 2.02
GLI3-202ENST00000428534 WDR46O15213 610 aaKnown RBP27.65■■■□□ 2.02
GLI3-202ENST00000428534 ASCC2Q9H1I8 757 aaPredicted RBP27.65■■■□□ 2.02
GLI3-202ENST00000428534 STX8Q9UNK0 236 aa27.65■■■□□ 2.02
GLI3-202ENST00000428534 SP3Q02447 781 aa27.64■■■□□ 2.02
GLI3-202ENST00000428534 CATSPERGQ6ZRH7 1159 aa27.64■■■□□ 2.02
GLI3-202ENST00000428534 RALYLQ86SE5 291 aaKnown RBP27.64■■■□□ 2.02
GLI3-202ENST00000428534 CLEC10AQ8IUN9 316 aa27.64■■■□□ 2.02
GLI3-202ENST00000428534 ERO1AQ96HE7 468 aa27.64■■■□□ 2.02
GLI3-202ENST00000428534 TACC3Q9Y6A5 838 aa27.64■■■□□ 2.02
GLI3-202ENST00000428534 CYP2C8P10632 490 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 NOVP48745 357 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 KIF22Q14807 665 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 NECTIN1Q15223 517 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 C17orf99Q6UX52 265 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 GMCL1P1Q8NEA9 526 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 NCOA7Q8NI08 942 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 RPAP3Q9H6T3 665 aaPredicted RBP27.63■■■□□ 2.01
GLI3-202ENST00000428534 IL17RBQ9NRM6 502 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 HOXC10Q9NYD6 342 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 NEDD4P46934 1319 aa27.63■■■□□ 2.01
GLI3-202ENST00000428534 F5H6K3 240 aa27.62■■■□□ 2.01
GLI3-202ENST00000428534 KDM4AO75164 1064 aa27.62■■■□□ 2.01
GLI3-202ENST00000428534 KLRC3Q07444 240 aa27.62■■■□□ 2.01
GLI3-202ENST00000428534 DGKHQ86XP1 1220 aa27.62■■■□□ 2.01
GLI3-202ENST00000428534 HTTP42858 3142 aa27.62■■■□□ 2.01
GLI3-202ENST00000428534 B4E1Z4 1266 aa27.61■■■□□ 2.01
GLI3-202ENST00000428534 RAD21O60216 631 aa27.61■■■□□ 2.01
GLI3-202ENST00000428534 ZKSCAN1P17029 563 aaPredicted RBP27.61■■■□□ 2.01
GLI3-202ENST00000428534 R3HDMLQ9H3Y0 253 aa27.61■■■□□ 2.01
GLI3-202ENST00000428534 HPS5Q9UPZ3 1129 aa27.61■■■□□ 2.01
GLI3-202ENST00000428534 E7EWF7 191 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 SLC27A2O14975 620 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 SLC34A2O95436 690 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 TOP1P11387 765 aaKnown RBP27.6■■■□□ 2.01
GLI3-202ENST00000428534 COG2Q14746 738 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 CREB3L3Q68CJ9 461 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 UBAC1Q9BSL1 405 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 TANGO6Q9C0B7 1094 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 ZSWIM5Q9P217 1185 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 MYPNQ86TC9 1320 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 ADGRA2Q96PE1 1338 aa27.6■■■□□ 2.01
GLI3-202ENST00000428534 HERVK_113P62684 666 aa27.59■■■□□ 2.01
GLI3-202ENST00000428534 SART3Q15020 963 aaKnown RBP27.59■■■□□ 2.01
GLI3-202ENST00000428534 ZSCAN10Q96SZ4 725 aaPredicted RBP27.59■■■□□ 2.01
GLI3-202ENST00000428534 P2RX7Q99572 595 aaKnown RBP27.59■■■□□ 2.01
GLI3-202ENST00000428534 CPA4Q9UI42 421 aa27.59■■■□□ 2.01
GLI3-202ENST00000428534 KRT32Q14532 448 aa27.58■■■□□ 2.01
GLI3-202ENST00000428534 FAM110CQ1W6H9 321 aa27.58■■■□□ 2.01
GLI3-202ENST00000428534 LBX2Q6XYB7 198 aa27.58■■■□□ 2.01
GLI3-202ENST00000428534 SPICE1Q8N0Z3 855 aa27.58■■■□□ 2.01
GLI3-202ENST00000428534 MTA3Q9BTC8 594 aa27.58■■■□□ 2.01
GLI3-202ENST00000428534 ERICH2A1L162 156 aa27.57■■■□□ 2
GLI3-202ENST00000428534 GNRH1P01148 92 aa27.57■■■□□ 2
GLI3-202ENST00000428534 BCRP11274 1271 aa27.57■■■□□ 2
GLI3-202ENST00000428534 SLFN13Q68D06 897 aa27.57■■■□□ 2
GLI3-202ENST00000428534 NMT2O60551 498 aa27.56■■■□□ 2
GLI3-202ENST00000428534 NDUFB10O96000 172 aa27.56■■■□□ 2
GLI3-202ENST00000428534 TSGA10IPQ3SY00 556 aa27.56■■■□□ 2
GLI3-202ENST00000428534 LRRC47Q8N1G4 583 aaKnown RBP27.56■■■□□ 2
GLI3-202ENST00000428534 MB21D1Q8N884 522 aa27.56■■■□□ 2
GLI3-202ENST00000428534 ANKS1AQ92625 1134 aa27.56■■■□□ 2
GLI3-202ENST00000428534 GMCL1Q96IK5 515 aa27.56■■■□□ 2
GLI3-202ENST00000428534 CENPFP49454 3210 aa27.56■■■□□ 2
GLI3-202ENST00000428534 FLOT1O75955 427 aa27.55■■■□□ 2
GLI3-202ENST00000428534 PKN2Q16513 984 aaKnown RBP27.55■■■□□ 2
GLI3-202ENST00000428534 KIAA1755Q5JYT7 1200 aa27.55■■■□□ 2
GLI3-202ENST00000428534 TMEM47Q9BQJ4 181 aa27.55■■■□□ 2
GLI3-202ENST00000428534 MORF4L1Q9UBU8 362 aa27.55■■■□□ 2
GLI3-202ENST00000428534 FEM1BQ9UK73 627 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms