RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PDE6BP35913 854 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 CDK8P49336 464 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 ISM2Q6H9L7 571 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZNF579Q8NAF0 562 aaKnown RBP16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 TNFRSF25Q93038 417 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
APOBEC3D-202ENST00000427494 ALDH1B1P30837 517 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 CCDC186Q7Z3E2 898 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 EYA3Q99504 573 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 DAGLAQ9Y4D2 1042 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 GNAQP50148 359 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 NOM1Q5C9Z4 860 aaKnown RBP16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 DPP8Q6V1X1 898 aaPredicted RBP16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 MRFAP1L1Q96HT8 127 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 CSRNP2Q9H175 543 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 MTMR7Q9Y216 660 aa16.04■□□□□ 0.16
APOBEC3D-202ENST00000427494 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 TTC38Q5R3I4 469 aa16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 C17orf53Q8N3J3 647 aaPredicted RBP16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
APOBEC3D-202ENST00000427494 WNT7AO00755 349 aa16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 POLR2DO15514 142 aaKnown RBP16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 BMP15O95972 392 aa16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZNF174Q15697 407 aa16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 MASTLQ96GX5 879 aa16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 PYCARDQ9ULZ3 195 aa16.02■□□□□ 0.16
APOBEC3D-202ENST00000427494 SMTNL1A8MU46 457 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 FOXN1O15353 648 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 TPM4P67936 248 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 NOLC1Q14978 699 aaKnown RBP eCLIP16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 DOK7Q18PE1 504 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 ELOA2Q8IYF1 753 aaPredicted RBP16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 GPKOWQ92917 476 aaPredicted RBP eCLIP16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 SUGT1Q9Y2Z0 365 aa16.02■□□□□ 0.15
APOBEC3D-202ENST00000427494 G3V3G9 751 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 CALML3P27482 149 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 PICALMQ13492 652 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 NEDD1Q8NHV4 660 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 SH3GLB2Q9NR46 395 aa16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 TNS1Q9HBL0 1735 aaKnown RBP16.01■□□□□ 0.15
APOBEC3D-202ENST00000427494 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
APOBEC3D-202ENST00000427494 POSTNQ15063 836 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 USP49Q70CQ1 688 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 PDILTQ8N807 584 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 ZNF622Q969S3 477 aaKnown RBP eCLIP16■□□□□ 0.15
APOBEC3D-202ENST00000427494 MXD3Q9BW11 206 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 TTF2Q9UNY4 1162 aaKnown RBP16■□□□□ 0.15
APOBEC3D-202ENST00000427494 R3HCC1Q9Y3T6 440 aaKnown RBP16■□□□□ 0.15
APOBEC3D-202ENST00000427494 PCDHA5Q9Y5H7 936 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 ADAMTSL1Q8N6G6 1762 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 CCDC144BQ3MJ40 725 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 FOXP4Q8IVH2 680 aaPredicted RBP16■□□□□ 0.15
APOBEC3D-202ENST00000427494 BLIDQ8IZY5 108 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 FERMT2Q96AC1 680 aa16■□□□□ 0.15
APOBEC3D-202ENST00000427494 MYH8P13535 1937 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 PALM3A6NDB9 673 aaPredicted RBP15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 IKBKBO14920 756 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 ADAMTS3O15072 1205 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 ACTN4O43707 911 aaKnown RBP15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 NCAPHQ15003 741 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 SLC35G1Q2M3R5 365 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 LZTS2Q9BRK4 669 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 SPTLC3Q9NUV7 552 aa15.99■□□□□ 0.15
APOBEC3D-202ENST00000427494 CYTH3O43739 400 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 GOLGA8HP0CJ92 632 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 LRMPQ12912 555 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 PTGDRQ13258 359 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 DNTTIP2Q5QJE6 756 aaKnown RBP15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 WWC2Q6AWC2 1192 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 KANK3Q6NY19 840 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 CEP95Q96GE4 821 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 EPSTI1Q96J88 318 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 TOP1P11387 765 aaKnown RBP15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 RXRBP28702 533 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 SCNN1DP51172 638 aa15.98■□□□□ 0.15
APOBEC3D-202ENST00000427494 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms