RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 PRC1O43663 620 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 VCAM1P19320 739 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 FAM83BQ5T0W9 1011 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 POTEEQ6S8J3 1075 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 KCNB2Q92953 911 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 ZSCAN10Q96SZ4 725 aaPredicted RBP18.13■□□□□ 0.49
PHF1-203ENST00000427004 MYL10Q9BUA6 226 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 CPVLQ9H3G5 476 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 ARHGEF10LQ9HCE6 1279 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 TMX2Q9Y320 296 aa18.13■□□□□ 0.49
PHF1-203ENST00000427004 TESPA1A2RU30 521 aaPredicted RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 DTNBO60941 627 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 TTLL1O95922 423 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 NDUFB10O96000 172 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 TAL1P17542 331 aaPredicted RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 MAP2K2P36507 400 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 TM4SF4P48230 202 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 TRDNQ13061 729 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 SEC23AQ15436 765 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 USP17L2Q6R6M4 530 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 KIAA1683Q9H0B3 1180 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 RPAP3Q9H6T3 665 aaPredicted RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 VCPKMTQ9H867 229 aa18.12■□□□□ 0.49
PHF1-203ENST00000427004 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
PHF1-203ENST00000427004 F5H6K3 240 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 RXRAP19793 462 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 MCCP23508 829 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 SNAP25P60880 206 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 CAP1Q01518 475 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 KLRC3Q07444 240 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 CRHR2Q13324 411 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 TTBK2Q6IQ55 1244 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 GINM1Q9NU53 330 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 TMOD4Q9NZQ9 345 aa18.11■□□□□ 0.49
PHF1-203ENST00000427004 CASP8AP2Q9UKL3 1982 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
PHF1-203ENST00000427004 SREBF2Q12772 1141 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 TAF1CQ15572 869 aaPredicted RBP18.1■□□□□ 0.49
PHF1-203ENST00000427004 TMEM67Q5HYA8 995 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 SLFN13Q68D06 897 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 P2RX7Q99572 595 aaKnown RBP18.1■□□□□ 0.49
PHF1-203ENST00000427004 GPCPD1Q9NPB8 672 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 WBP1LQ9NX94 342 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 CPA4Q9UI42 421 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 AGTPBP1Q9UPW5 1226 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
PHF1-203ENST00000427004 SH2B2O14492 632 aaPredicted RBP18.09■□□□□ 0.49
PHF1-203ENST00000427004 EXOSC10Q01780 885 aaKnown RBP18.09■□□□□ 0.49
PHF1-203ENST00000427004 ANKRD23Q86SG2 305 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 IGDCC4Q8TDY8 1250 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 UBAC1Q9BSL1 405 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 BACH2Q9BYV9 841 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 TANGO6Q9C0B7 1094 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 ASCC2Q9H1I8 757 aaPredicted RBP18.09■□□□□ 0.49
PHF1-203ENST00000427004 LY9Q9HBG7 655 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 TCP11L1Q9NUJ3 509 aa18.09■□□□□ 0.49
PHF1-203ENST00000427004 C19orf81C9J6K1 198 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 PCP11498 1178 aaKnown RBP18.08■□□□□ 0.48
PHF1-203ENST00000427004 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
PHF1-203ENST00000427004 NOVP48745 357 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 NOL8Q76FK4 1167 aaKnown RBP18.08■□□□□ 0.48
PHF1-203ENST00000427004 IQCA1Q86XH1 822 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 CCDC144CPQ8IYA2 1237 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 MKL1Q969V6 931 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 C12orf42Q96LP6 360 aa18.08■□□□□ 0.48
PHF1-203ENST00000427004 TOP1P11387 765 aaKnown RBP18.07■□□□□ 0.48
PHF1-203ENST00000427004 SLC16A2P36021 539 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 WTAPQ15007 396 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 IFIT1BQ5T764 474 aaKnown RBP18.07■□□□□ 0.48
PHF1-203ENST00000427004 Q6ZUG5 572 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 FASTKD5Q7L8L6 764 aaKnown RBP18.07■□□□□ 0.48
PHF1-203ENST00000427004 STAG2Q8N3U4 1231 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 PROCA1Q8NCQ7 364 aaPredicted RBP18.07■□□□□ 0.48
PHF1-203ENST00000427004 PNMA1Q8ND90 353 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 ATG4CQ96DT6 458 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 TAOK2Q9UL54 1235 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
PHF1-203ENST00000427004 ADGRA2Q96PE1 1338 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 BAZ2BQ9UIF8 2168 aaKnown RBP18.06■□□□□ 0.48
PHF1-203ENST00000427004 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 MCM5P33992 734 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
PHF1-203ENST00000427004 USP14P54578 494 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 APOBRQ0VD83 1088 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 CATSPERGQ6ZRH7 1159 aa18.06■□□□□ 0.48
PHF1-203ENST00000427004 KIF2CQ99661 725 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms