RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 SEPT2Q15019 361 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 CDAN1Q8IWY9 1227 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 FBXO18Q8NFZ0 1043 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.4
GINS3-203ENST00000426538 ZC3H4Q9UPT8 1303 aaKnown RBP17.52■□□□□ 0.39
GINS3-203ENST00000426538 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.39
GINS3-203ENST00000426538 GH2P01242 217 aa17.52■□□□□ 0.39
GINS3-203ENST00000426538 ICA1Q05084 483 aa17.52■□□□□ 0.39
GINS3-203ENST00000426538 CLEC10AQ8IUN9 316 aa17.52■□□□□ 0.39
GINS3-203ENST00000426538 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.39
GINS3-203ENST00000426538 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.39
GINS3-203ENST00000426538 HOOK2Q96ED9 719 aa17.52■□□□□ 0.39
GINS3-203ENST00000426538 TEPSINQ96N21 525 aa17.52■□□□□ 0.39
GINS3-203ENST00000426538 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.39
GINS3-203ENST00000426538 EEF2P13639 858 aaKnown RBP17.51■□□□□ 0.39
GINS3-203ENST00000426538 XBP1P17861 261 aa17.51■□□□□ 0.39
GINS3-203ENST00000426538 PTMSP20962 102 aa17.51■□□□□ 0.39
GINS3-203ENST00000426538 HIRAP54198 1017 aaPredicted RBP17.51■□□□□ 0.39
GINS3-203ENST00000426538 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
GINS3-203ENST00000426538 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
GINS3-203ENST00000426538 MKL1Q969V6 931 aa17.51■□□□□ 0.39
GINS3-203ENST00000426538 GGA3Q9NZ52 723 aa17.51■□□□□ 0.39
GINS3-203ENST00000426538 RBM27Q9P2N5 1060 aaKnown RBP17.51■□□□□ 0.39
GINS3-203ENST00000426538 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
GINS3-203ENST00000426538 FUT2Q10981 343 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 PDHBP11177 359 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 RRP1BQ14684 758 aaKnown RBP17.5■□□□□ 0.39
GINS3-203ENST00000426538 SHROOM1Q2M3G4 852 aaPredicted RBP17.5■□□□□ 0.39
GINS3-203ENST00000426538 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
GINS3-203ENST00000426538 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 RAD21O60216 631 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 CAP2P40123 477 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 ASPRV1Q53RT3 343 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 KRT40Q6A162 431 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 PPP2R3BQ9Y5P8 575 aa17.49■□□□□ 0.39
GINS3-203ENST00000426538 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
GINS3-203ENST00000426538 PITPNM2Q9BZ72 1349 aa17.48■□□□□ 0.39
GINS3-203ENST00000426538 GREB1LQ9C091 1923 aaPredicted RBP17.48■□□□□ 0.39
GINS3-203ENST00000426538 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
GINS3-203ENST00000426538 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
GINS3-203ENST00000426538 GNL2Q13823 731 aaKnown RBP17.48■□□□□ 0.39
GINS3-203ENST00000426538 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
GINS3-203ENST00000426538 NBPF12Q5TAG4 269 aaPredicted RBP17.48■□□□□ 0.39
GINS3-203ENST00000426538 DCPSQ96C86 337 aaKnown RBP17.48■□□□□ 0.39
GINS3-203ENST00000426538 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
GINS3-203ENST00000426538 ARHGEF10LQ9HCE6 1279 aa17.48■□□□□ 0.39
GINS3-203ENST00000426538 GJB4Q9NTQ9 266 aa17.48■□□□□ 0.39
GINS3-203ENST00000426538 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 ASNSP08243 561 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 SNHG28P0DPA3 235 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 JAG1P78504 1218 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 RESTQ13127 1097 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
GINS3-203ENST00000426538 PIBF1Q8WXW3 757 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 ZBTB21Q9ULJ3 1066 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
GINS3-203ENST00000426538 PKN1Q16512 942 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 SIAH1Q8IUQ4 282 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
GINS3-203ENST00000426538 MYH4Q9Y623 1939 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 PHF20L1A8MW92 1017 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
GINS3-203ENST00000426538 SCG2P13521 617 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 KRT85P78386 507 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 PFKFB3Q16875 520 aaPredicted RBP17.46■□□□□ 0.39
GINS3-203ENST00000426538 CSPP1Q1MSJ5 1256 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 SLFN13Q68D06 897 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 USP50Q70EL3 339 aaPredicted RBP17.46■□□□□ 0.39
GINS3-203ENST00000426538 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
GINS3-203ENST00000426538 SYNPO2Q9UMS6 1093 aa17.46■□□□□ 0.39
GINS3-203ENST00000426538 FRMPD2Q68DX3 1309 aaPredicted RBP17.45■□□□□ 0.38
GINS3-203ENST00000426538 MYH6P13533 1939 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 F5H6K3 240 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
GINS3-203ENST00000426538 EPHX2P34913 555 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 SLC1A4P43007 532 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 KLRC3Q07444 240 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 ZNF543Q08ER8 600 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 FAM173BQ6P4H8 233 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 RASGRP2Q7LDG7 609 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 BRAPQ7Z569 592 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 SULF1Q8IWU6 871 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 GMCL1P1Q8NEA9 526 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 DCAF4Q8WV16 495 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms