RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ADAMTS19Q8TE59 1207 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 ASB2Q96Q27 587 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 MOV10L1Q9BXT6 1211 aaKnown RBP17.37■□□□□ 0.37
HDAC6-206ENST00000426196 TMEM39AQ9NV64 488 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 SERPINB13Q9UIV8 391 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 PHF24Q9UPV7 400 aa17.37■□□□□ 0.37
HDAC6-206ENST00000426196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-206ENST00000426196 A0A0G2JMZ2 1700 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 CHD7Q9P2D1 2997 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 RARBP10826 455 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 ABCB5Q2M3G0 1257 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 PRAMEF19Q5SWL8 479 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 ADGRA1Q86SQ6 560 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 RNF180Q86T96 592 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 UHRF1Q96T88 793 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-206ENST00000426196 SPATC1LQ9H0A9 340 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 XPNPEP3Q9NQH7 507 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 HOXC10Q9NYD6 342 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 XIRP2A4UGR9 3374 aa17.36■□□□□ 0.37
HDAC6-206ENST00000426196 COBLO75128 1261 aa17.35■□□□□ 0.37
HDAC6-206ENST00000426196 ERCC3P19447 782 aa17.35■□□□□ 0.37
HDAC6-206ENST00000426196 MRPS5P82675 430 aaKnown RBP17.35■□□□□ 0.37
HDAC6-206ENST00000426196 CERKLQ49MI3 558 aaPredicted RBP17.35■□□□□ 0.37
HDAC6-206ENST00000426196 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
HDAC6-206ENST00000426196 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
HDAC6-206ENST00000426196 EHD4Q9H223 541 aa17.35■□□□□ 0.37
HDAC6-206ENST00000426196 IGSF3O75054 1194 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 GNAI3P08754 354 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 USP5P45974 858 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 MTX1Q13505 466 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 COG2Q14746 738 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 CERS3Q8IU89 383 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 ABRAQ8N0Z2 381 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 TCF20Q9UGU0 1960 aaKnown RBP17.34■□□□□ 0.37
HDAC6-206ENST00000426196 NRBP1Q9UHY1 535 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 REV3LO60673 3130 aa17.34■□□□□ 0.37
HDAC6-206ENST00000426196 A0A1W2PQ45 241 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-206ENST00000426196 A0A1W2PQY0 241 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 ANP32CO43423 234 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
HDAC6-206ENST00000426196 G3BP1Q13283 466 aaKnown RBP eCLIP17.33■□□□□ 0.368e-6■□□□□ 9
HDAC6-206ENST00000426196 CCDC158Q5M9N0 1113 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 CCDC174Q6PII3 467 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 NCAPG2Q86XI2 1143 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 MB21D1Q8N884 522 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 MAML3Q96JK9 1138 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 PRDM12Q9H4Q4 367 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 MROH8Q9H579 483 aa17.33■□□□□ 0.36
HDAC6-206ENST00000426196 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.36
HDAC6-206ENST00000426196 PGK1P00558 417 aa17.32■□□□□ 0.36
HDAC6-206ENST00000426196 PLS1Q14651 629 aa17.32■□□□□ 0.36
HDAC6-206ENST00000426196 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
HDAC6-206ENST00000426196 SLC44A5Q8NCS7 719 aa17.32■□□□□ 0.36
HDAC6-206ENST00000426196 TOX2Q96NM4 488 aa17.32■□□□□ 0.36
HDAC6-206ENST00000426196 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-206ENST00000426196 FCER1AP12319 257 aa17.31■□□□□ 0.36
HDAC6-206ENST00000426196 CYP7A1P22680 504 aa17.31■□□□□ 0.36
HDAC6-206ENST00000426196 FAAP100Q0VG06 881 aa17.31■□□□□ 0.36
HDAC6-206ENST00000426196 PPIGQ13427 754 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■■□□ 17.1
HDAC6-206ENST00000426196 ANKRD33Q7Z3H0 272 aa17.31■□□□□ 0.36
HDAC6-206ENST00000426196 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.31■□□□□ 0.364e-7■■■□□ 15.3
HDAC6-206ENST00000426196 PBX4Q9BYU1 374 aa17.31■□□□□ 0.36
HDAC6-206ENST00000426196 MYH8P13535 1937 aa17.31■□□□□ 0.36
HDAC6-206ENST00000426196 ROBO3Q96MS0 1386 aa17.3■□□□□ 0.36
HDAC6-206ENST00000426196 TIMP1P01033 207 aa17.3■□□□□ 0.36
HDAC6-206ENST00000426196 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-206ENST00000426196 NUP133Q8WUM0 1156 aa17.3■□□□□ 0.36
HDAC6-206ENST00000426196 C1QTNF1Q9BXJ1 281 aa17.3■□□□□ 0.36
HDAC6-206ENST00000426196 STARD7Q9NQZ5 370 aa17.3■□□□□ 0.36
HDAC6-206ENST00000426196 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
HDAC6-206ENST00000426196 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-206ENST00000426196 PIEZO1Q92508 2521 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 IGFBP4P22692 258 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 PBX2P40425 430 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 SEPT2Q15019 361 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 CCDC85BQ15834 202 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-206ENST00000426196 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
HDAC6-206ENST00000426196 TSPYL2Q9H2G4 693 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-206ENST00000426196 GBF1Q92538 1859 aa17.29■□□□□ 0.36
HDAC6-206ENST00000426196 MROH7Q68CQ1 1323 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
HDAC6-206ENST00000426196 IDH1O75874 414 aaKnown RBP17.28■□□□□ 0.36
HDAC6-206ENST00000426196 AKR1A1P14550 325 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 DSG3P32926 999 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 SHMT1P34896 483 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 ZAP70P43403 619 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 MFSD5Q6N075 450 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 GPR108Q9NPR9 543 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms