RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 SHCBP1Q8NEM2 672 aa18.28■□□□□ 0.52
LIMK2-205ENST00000425203 RIOK1Q9BRS2 568 aaKnown RBP18.28■□□□□ 0.52
LIMK2-205ENST00000425203 SPATC1LQ9H0A9 340 aa18.28■□□□□ 0.52
LIMK2-205ENST00000425203 SLC5A4Q9NY91 659 aa18.28■□□□□ 0.52
LIMK2-205ENST00000425203 KBTBD13C9JR72 458 aa18.27■□□□□ 0.52
LIMK2-205ENST00000425203 SEPT4O43236 478 aa18.27■□□□□ 0.52
LIMK2-205ENST00000425203 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
LIMK2-205ENST00000425203 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.52
LIMK2-205ENST00000425203 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
LIMK2-205ENST00000425203 A0A1W2PRG0 241 aa18.26■□□□□ 0.51
LIMK2-205ENST00000425203 MPHOSPH10O00566 681 aaKnown RBP18.26■□□□□ 0.51
LIMK2-205ENST00000425203 ERCC3P19447 782 aa18.26■□□□□ 0.51
LIMK2-205ENST00000425203 SHHQ15465 462 aa18.26■□□□□ 0.51
LIMK2-205ENST00000425203 CRNKL1Q9BZJ0 848 aaKnown RBP18.26■□□□□ 0.51
LIMK2-205ENST00000425203 MROH8Q9H579 483 aa18.26■□□□□ 0.51
LIMK2-205ENST00000425203 EYSQ5T1H1 3165 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 COBLO75128 1261 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
LIMK2-205ENST00000425203 ABRAQ8N0Z2 381 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 CDX2Q99626 313 aaPredicted RBP18.25■□□□□ 0.51
LIMK2-205ENST00000425203 TANGO6Q9C0B7 1094 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 SEMA6BQ9H3T3 888 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 PRUNE2Q8WUY3 3088 aa18.25■□□□□ 0.51
LIMK2-205ENST00000425203 DSG3P32926 999 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 SNX17Q15036 470 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 SLC9C2Q5TAH2 1124 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 C1orf53Q5VUE5 145 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 FTSJ3Q8IY81 847 aaKnown RBP18.24■□□□□ 0.51
LIMK2-205ENST00000425203 PRDM5Q9NQX1 630 aaPredicted RBP18.24■□□□□ 0.51
LIMK2-205ENST00000425203 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 TTC28Q96AY4 2481 aa18.24■□□□□ 0.51
LIMK2-205ENST00000425203 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
LIMK2-205ENST00000425203 ADCYAP1R1P41586 468 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 C9orf50Q5SZB4 431 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 TMEM179Q6ZVK1 233 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 AACSQ86V21 672 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 BADQ92934 168 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 FRMPD3Q5JV73 1810 aa18.23■□□□□ 0.51
LIMK2-205ENST00000425203 FCER1AP12319 257 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 SMAD3P84022 425 aaKnown RBP18.22■□□□□ 0.51
LIMK2-205ENST00000425203 PLS1Q14651 629 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 LRRC41Q15345 812 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 NCAPG2Q86XI2 1143 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
LIMK2-205ENST00000425203 SWAP70Q9UH65 585 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
LIMK2-205ENST00000425203 SPTBN5Q9NRC6 3674 aaKnown RBP18.21■□□□□ 0.51
LIMK2-205ENST00000425203 FLOT1O75955 427 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 PDE6AP16499 860 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 KIAA1755Q5JYT7 1200 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 SIAH1Q8IUQ4 282 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 MAML3Q96JK9 1138 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 SH2D4AQ9H788 454 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 PDLIM7Q9NR12 457 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
LIMK2-205ENST00000425203 RLFQ13129 1914 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 SLC25A27O95847 323 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 EVX2Q03828 476 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 HSP90AB4PQ58FF6 505 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 CEP85Q6P2H3 762 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 SH3RF1Q7Z6J0 888 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-205ENST00000425203 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 ARHGEF10LQ9HCE6 1279 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 ZNF532Q9HCE3 1301 aa18.2■□□□□ 0.5
LIMK2-205ENST00000425203 RLBP1P12271 317 aa18.19■□□□□ 0.5
LIMK2-205ENST00000425203 TLE2Q04725 743 aa18.19■□□□□ 0.5
LIMK2-205ENST00000425203 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
LIMK2-205ENST00000425203 SDR42E1Q8WUS8 393 aa18.19■□□□□ 0.5
LIMK2-205ENST00000425203 CCDC17Q96LX7 622 aa18.19■□□□□ 0.5
LIMK2-205ENST00000425203 VCPKMTQ9H867 229 aa18.19■□□□□ 0.5
LIMK2-205ENST00000425203 SMCHD1A6NHR9 2005 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 TCRBV5S4A2TA0A5A2 114 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 RARBP10826 455 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 FAM47AQ5JRC9 791 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 RNF180Q86T96 592 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 SPICE1Q8N0Z3 855 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 SLC44A5Q8NCS7 719 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIMK2-205ENST00000425203 TTYH1Q9H313 450 aaPredicted RBP18.18■□□□□ 0.5
LIMK2-205ENST00000425203 IL1RAPL2Q9NP60 686 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 XPNPEP3Q9NQH7 507 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 PHF24Q9UPV7 400 aa18.18■□□□□ 0.5
LIMK2-205ENST00000425203 ZNF236Q9UL36 1845 aa18.17■□□□□ 0.5
LIMK2-205ENST00000425203 GOLIM4O00461 696 aa18.17■□□□□ 0.5
LIMK2-205ENST00000425203 WDR46O15213 610 aaKnown RBP18.17■□□□□ 0.5
LIMK2-205ENST00000425203 CYP2D6P10635 497 aa18.17■□□□□ 0.5
LIMK2-205ENST00000425203 ICA1Q05084 483 aa18.17■□□□□ 0.5
LIMK2-205ENST00000425203 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms