RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 ZNF287Q9HBT7 754 aa21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 NYAP2Q9P242 653 aa21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 ANAPC4Q9UJX5 808 aa21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 TACC3Q9Y6A5 838 aa21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 CCDC171Q6TFL3 1326 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 SPDYE16A6NNV3 312 aaPredicted RBP21.32■■□□□ 1
IGHV3-47-201ENST00000425060 FGAP02671 866 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 FLT3LGP49771 235 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 ERVK-9P63128 1117 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 ERVK-24P63145 666 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 PDE4BQ07343 736 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 TTC22Q5TAA0 569 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 NBPF11Q86T75 865 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
IGHV3-47-201ENST00000425060 RAET1EQ8TD07 263 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 SH3TC2Q8TF17 1288 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 GJD2Q9UKL4 321 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 RABGAP1Q9Y3P9 1069 aa21.32■■□□□ 1
IGHV3-47-201ENST00000425060 CENPFP49454 3210 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 FGRP09769 529 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 IRF5Q13568 498 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 COG2Q14746 738 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 NEDD1Q8NHV4 660 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 COA7Q96BR5 231 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 RLFQ13129 1914 aa21.31■■□□□ 1
IGHV3-47-201ENST00000425060 ZMYM6O95789 1325 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 WDR46O15213 610 aaKnown RBP21.3■■□□□ 1
IGHV3-47-201ENST00000425060 SLC3A2P08195 630 aaKnown RBP21.3■■□□□ 1
IGHV3-47-201ENST00000425060 GRK4P32298 578 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 ATP2B2Q01814 1243 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 CTDSPL2Q05D32 466 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 MKL1Q969V6 931 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 INCENPQ9NQS7 918 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 HOXC10Q9NYD6 342 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 BTBD7Q9P203 1132 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 PLIN4Q96Q06 1357 aa21.3■■□□□ 1
IGHV3-47-201ENST00000425060 HIP1O00291 1037 aa21.29■■□□□ 1
IGHV3-47-201ENST00000425060 CWC27Q6UX04 472 aaKnown RBP21.29■■□□□ 1
IGHV3-47-201ENST00000425060 PAGR1Q9BTK6 254 aa21.29■■□□□ 1
IGHV3-47-201ENST00000425060 PORCNQ9H237 461 aa21.29■■□□□ 1
IGHV3-47-201ENST00000425060 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
IGHV3-47-201ENST00000425060 POTEFA5A3E0 1075 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 DSG3P32926 999 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 TFAP4Q01664 338 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 FAM47AQ5JRC9 791 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 PXYLP1Q8TE99 480 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 CEP95Q96GE4 821 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 TANGO6Q9C0B7 1094 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 DIAPH3Q9NSV4 1193 aa21.28■■□□□ 1
IGHV3-47-201ENST00000425060 ADCY3O60266 1144 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 TSPY3P0CV98 308 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 TSPY8P0CW00 308 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 MAPK4P31152 587 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
IGHV3-47-201ENST00000425060 SLAIN1Q8ND83 568 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 GOPCQ9HD26 462 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 CLIP2Q9UDT6 1046 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 ADAMTS5Q9UNA0 930 aa21.27■■□□□ 1
IGHV3-47-201ENST00000425060 PLXNB2O15031 1838 aa21.27■□□□□ 0.99
IGHV3-47-201ENST00000425060 KIAA0100Q14667 2235 aaKnown RBP21.27■□□□□ 0.99
IGHV3-47-201ENST00000425060 RBBP6Q7Z6E9 1792 aaKnown RBP21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 F5H6K3 240 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 ORC4O43929 436 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 MLLT1Q03111 559 aaPredicted RBP21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 KLRC3Q07444 240 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 MTFR1Q15390 333 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 USP6NLQ92738 828 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 IL25Q9H293 177 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 SYNPO2Q9UMS6 1093 aa21.26■□□□□ 0.99
IGHV3-47-201ENST00000425060 TTLL1O95922 423 aa21.25■□□□□ 0.99
IGHV3-47-201ENST00000425060 GPR142Q7Z601 462 aa21.25■□□□□ 0.99
IGHV3-47-201ENST00000425060 NBPF3Q9H094 633 aa21.25■□□□□ 0.99
IGHV3-47-201ENST00000425060 IL17RBQ9NRM6 502 aa21.25■□□□□ 0.99
IGHV3-47-201ENST00000425060 PARP14Q460N5 1801 aa21.25■□□□□ 0.99
IGHV3-47-201ENST00000425060 A0A0G2JMZ2 1700 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 FLOT1O75955 427 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 ELNP15502 786 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 NOVP48745 357 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 CCNA1P78396 465 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 MORN1Q5T089 497 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 FAM83BQ5T0W9 1011 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 PLEKHH3Q7Z736 793 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 ATG4CQ96DT6 458 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 TMEM106CQ9BVX2 250 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 FBXO28Q9NVF7 368 aa21.24■□□□□ 0.99
IGHV3-47-201ENST00000425060 NDUFB10O96000 172 aa21.23■□□□□ 0.99
IGHV3-47-201ENST00000425060 MB21D1Q8N884 522 aa21.23■□□□□ 0.99
IGHV3-47-201ENST00000425060 NUDT12Q9BQG2 462 aa21.23■□□□□ 0.99
IGHV3-47-201ENST00000425060 DSCC1Q9BVC3 393 aa21.23■□□□□ 0.99
IGHV3-47-201ENST00000425060 MYH4Q9Y623 1939 aa21.23■□□□□ 0.99
IGHV3-47-201ENST00000425060 MYCP01106 439 aaPredicted RBP21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 EN2P19622 333 aaPredicted RBP21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 HAND2P61296 217 aa21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 UBXN2AP68543 259 aa21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 GMCL1P1Q8NEA9 526 aa21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 SOCS4Q8WXH5 440 aa21.22■□□□□ 0.99
IGHV3-47-201ENST00000425060 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms